Gene : orange1.1g022100m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR13871:SF43 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  732
Name:  ? orange1.1g022100m.g Secondary Identifier:  ? PAC:18091993
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7039 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g022100m.g 0.5kb upstream 0.5kb upstream 1640 true scaffold00002: 4964810-4966449 Citrus sinensis
orange1.1g022100m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00002: 4965950-4966449 Citrus sinensis
orange1.1g022100m.g 0.5kb downstream 0.5kb downstream 1640 true scaffold00002: 4964310-4965949 Citrus sinensis
orange1.1g022100m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00002: 4964310-4964809 Citrus sinensis
orange1.1g022100m.g 1.0kb upstream 1.0kb upstream 2140 true scaffold00002: 4964810-4966949 Citrus sinensis
orange1.1g022100m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00002: 4965950-4966949 Citrus sinensis
orange1.1g022100m.g 1.0kb downstream 1.0kb downstream 2140 true scaffold00002: 4963810-4965949 Citrus sinensis
orange1.1g022100m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00002: 4963810-4964809 Citrus sinensis
orange1.1g022100m.g 2.0kb upstream 2.0kb upstream 3140 true scaffold00002: 4964810-4967949 Citrus sinensis
orange1.1g022100m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00002: 4965950-4967949 Citrus sinensis
orange1.1g022100m.g 2.0kb downstream 2.0kb downstream 3140 true scaffold00002: 4962810-4965949 Citrus sinensis
orange1.1g022100m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00002: 4962810-4964809 Citrus sinensis
orange1.1g022100m.g 5.0kb upstream 5.0kb upstream 6140 true scaffold00002: 4964810-4970949 Citrus sinensis
orange1.1g022100m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00002: 4965950-4970949 Citrus sinensis
orange1.1g022100m.g 5.0kb downstream 5.0kb downstream 6140 true scaffold00002: 4959810-4965949 Citrus sinensis
orange1.1g022100m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00002: 4959810-4964809 Citrus sinensis
orange1.1g022100m.g 10.0kb upstream 10.0kb upstream 11140 true scaffold00002: 4964810-4975949 Citrus sinensis
orange1.1g022100m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00002: 4965950-4975949 Citrus sinensis
orange1.1g022100m.g 10.0kb downstream 10.0kb downstream 11140 true scaffold00002: 4954810-4965949 Citrus sinensis
orange1.1g022100m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00002: 4954810-4964809 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340169 5266 SBM View MSA
124239800 5268 Malvidae View MSA
124061388 5270 Rosid View MSA
123737887 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain