Gene : orange1.1g016688m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21091:SF18 - RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I Genomic Order:  477
Name:  ? orange1.1g016688m.g Secondary Identifier:  ? PAC:18091881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g016688m.g 0.5kb upstream 0.5kb upstream 5345 true scaffold00002: 3287654-3292998 Citrus sinensis
orange1.1g016688m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00002: 3287654-3288153 Citrus sinensis
orange1.1g016688m.g 0.5kb downstream 0.5kb downstream 5345 true scaffold00002: 3288154-3293498 Citrus sinensis
orange1.1g016688m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00002: 3292999-3293498 Citrus sinensis
orange1.1g016688m.g 1.0kb upstream 1.0kb upstream 5845 true scaffold00002: 3287154-3292998 Citrus sinensis
orange1.1g016688m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00002: 3287154-3288153 Citrus sinensis
orange1.1g016688m.g 1.0kb downstream 1.0kb downstream 5845 true scaffold00002: 3288154-3293998 Citrus sinensis
orange1.1g016688m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00002: 3292999-3293998 Citrus sinensis
orange1.1g016688m.g 2.0kb upstream 2.0kb upstream 6845 true scaffold00002: 3286154-3292998 Citrus sinensis
orange1.1g016688m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00002: 3286154-3288153 Citrus sinensis
orange1.1g016688m.g 2.0kb downstream 2.0kb downstream 6845 true scaffold00002: 3288154-3294998 Citrus sinensis
orange1.1g016688m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00002: 3292999-3294998 Citrus sinensis
orange1.1g016688m.g 5.0kb upstream 5.0kb upstream 9845 true scaffold00002: 3283154-3292998 Citrus sinensis
orange1.1g016688m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00002: 3283154-3288153 Citrus sinensis
orange1.1g016688m.g 5.0kb downstream 5.0kb downstream 9845 true scaffold00002: 3288154-3297998 Citrus sinensis
orange1.1g016688m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00002: 3292999-3297998 Citrus sinensis
orange1.1g016688m.g 10.0kb upstream 10.0kb upstream 14845 true scaffold00002: 3278154-3292998 Citrus sinensis
orange1.1g016688m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00002: 3278154-3288153 Citrus sinensis
orange1.1g016688m.g 10.0kb downstream 10.0kb downstream 14845 true scaffold00002: 3288154-3302998 Citrus sinensis
orange1.1g016688m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00002: 3292999-3302998 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344254 5266 SBM View MSA
124238808 5268 Malvidae View MSA
124062180 5270 Rosid View MSA
123741052 5271 Pentapetalae View MSA
122786797 5272 Eudicot View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain