Gene : orange1.1g040426m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11239:SF14 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12 Genomic Order:  575
Name:  ? orange1.1g040426m.g Secondary Identifier:  ? PAC:18092379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040426m.g 0.5kb upstream 0.5kb upstream 2135 true scaffold00002: 3961421-3963555 Citrus sinensis
orange1.1g040426m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00002: 3963056-3963555 Citrus sinensis
orange1.1g040426m.g 0.5kb downstream 0.5kb downstream 2135 true scaffold00002: 3960921-3963055 Citrus sinensis
orange1.1g040426m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00002: 3960921-3961420 Citrus sinensis
orange1.1g040426m.g 1.0kb upstream 1.0kb upstream 2635 true scaffold00002: 3961421-3964055 Citrus sinensis
orange1.1g040426m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00002: 3963056-3964055 Citrus sinensis
orange1.1g040426m.g 1.0kb downstream 1.0kb downstream 2635 true scaffold00002: 3960421-3963055 Citrus sinensis
orange1.1g040426m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00002: 3960421-3961420 Citrus sinensis
orange1.1g040426m.g 2.0kb upstream 2.0kb upstream 3635 true scaffold00002: 3961421-3965055 Citrus sinensis
orange1.1g040426m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00002: 3963056-3965055 Citrus sinensis
orange1.1g040426m.g 2.0kb downstream 2.0kb downstream 3635 true scaffold00002: 3959421-3963055 Citrus sinensis
orange1.1g040426m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00002: 3959421-3961420 Citrus sinensis
orange1.1g040426m.g 5.0kb upstream 5.0kb upstream 6635 true scaffold00002: 3961421-3968055 Citrus sinensis
orange1.1g040426m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00002: 3963056-3968055 Citrus sinensis
orange1.1g040426m.g 5.0kb downstream 5.0kb downstream 6635 true scaffold00002: 3956421-3963055 Citrus sinensis
orange1.1g040426m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00002: 3956421-3961420 Citrus sinensis
orange1.1g040426m.g 10.0kb upstream 10.0kb upstream 11635 true scaffold00002: 3961421-3973055 Citrus sinensis
orange1.1g040426m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00002: 3963056-3973055 Citrus sinensis
orange1.1g040426m.g 10.0kb downstream 10.0kb downstream 11635 true scaffold00002: 3951421-3963055 Citrus sinensis
orange1.1g040426m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00002: 3951421-3961420 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344616 5266 SBM View MSA
124240995 5268 Malvidae View MSA
124067299 5270 Rosid View MSA
123753093 5271 Pentapetalae View MSA
122789188 5272 Eudicot View MSA
122045535 5273 Angiosperm View MSA
121350317 5274 Embryophyte View MSA
123425253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain