Gene : orange1.1g031590m.g C. sinensis v1.1
Defline:  (1 of 29) PF00118 - TCP-1/cpn60 chaperonin family Genomic Order:  55
Name:  ? orange1.1g031590m.g Secondary Identifier:  ? PAC:18116131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g031590m.g 0.5kb upstream 0.5kb upstream 2729 true scaffold00117: 426819-429547 Citrus sinensis
orange1.1g031590m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00117: 426819-427318 Citrus sinensis
orange1.1g031590m.g 0.5kb downstream 0.5kb downstream 2729 true scaffold00117: 427319-430047 Citrus sinensis
orange1.1g031590m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00117: 429548-430047 Citrus sinensis
orange1.1g031590m.g 1.0kb upstream 1.0kb upstream 3229 true scaffold00117: 426319-429547 Citrus sinensis
orange1.1g031590m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00117: 426319-427318 Citrus sinensis
orange1.1g031590m.g 1.0kb downstream 1.0kb downstream 3229 true scaffold00117: 427319-430547 Citrus sinensis
orange1.1g031590m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00117: 429548-430547 Citrus sinensis
orange1.1g031590m.g 2.0kb upstream 2.0kb upstream 4229 true scaffold00117: 425319-429547 Citrus sinensis
orange1.1g031590m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00117: 425319-427318 Citrus sinensis
orange1.1g031590m.g 2.0kb downstream 2.0kb downstream 4229 true scaffold00117: 427319-431547 Citrus sinensis
orange1.1g031590m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00117: 429548-431547 Citrus sinensis
orange1.1g031590m.g 5.0kb upstream 5.0kb upstream 7229 true scaffold00117: 422319-429547 Citrus sinensis
orange1.1g031590m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00117: 422319-427318 Citrus sinensis
orange1.1g031590m.g 5.0kb downstream 5.0kb downstream 7229 true scaffold00117: 427319-434547 Citrus sinensis
orange1.1g031590m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00117: 429548-434547 Citrus sinensis
orange1.1g031590m.g 10.0kb upstream 10.0kb upstream 12229 true scaffold00117: 417319-429547 Citrus sinensis
orange1.1g031590m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00117: 417319-427318 Citrus sinensis
orange1.1g031590m.g 10.0kb downstream 10.0kb downstream 11031 true scaffold00117: 427319-438349 Citrus sinensis
orange1.1g031590m.g 10.0kb downstream 10.0kb downstream 8802 false scaffold00117: 429548-438349 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121529681 5273 Angiosperm Singleton cluster - no MSA
124329282 5266 SBM Singleton cluster - no MSA
124174535 5268 Malvidae Singleton cluster - no MSA
123897070 5270 Rosid Singleton cluster - no MSA
123478929 5271 Pentapetalae Singleton cluster - no MSA
122514181 5272 Eudicot Singleton cluster - no MSA
120802443 5274 Embryophyte Singleton cluster - no MSA
122843997 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain