Gene : orange1.1g027625m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR21230:SF33 - VESICLE TRANSPORT V-SNARE 12 Genomic Order:  6
Name:  ? orange1.1g027625m.g Secondary Identifier:  ? PAC:18130480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027625m.g 0.5kb upstream 0.5kb upstream 2971 true scaffold00111: 58654-61624 Citrus sinensis
orange1.1g027625m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00111: 61125-61624 Citrus sinensis
orange1.1g027625m.g 0.5kb downstream 0.5kb downstream 2971 true scaffold00111: 58154-61124 Citrus sinensis
orange1.1g027625m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00111: 58154-58653 Citrus sinensis
orange1.1g027625m.g 1.0kb upstream 1.0kb upstream 3471 true scaffold00111: 58654-62124 Citrus sinensis
orange1.1g027625m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00111: 61125-62124 Citrus sinensis
orange1.1g027625m.g 1.0kb downstream 1.0kb downstream 3471 true scaffold00111: 57654-61124 Citrus sinensis
orange1.1g027625m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00111: 57654-58653 Citrus sinensis
orange1.1g027625m.g 2.0kb upstream 2.0kb upstream 4471 true scaffold00111: 58654-63124 Citrus sinensis
orange1.1g027625m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00111: 61125-63124 Citrus sinensis
orange1.1g027625m.g 2.0kb downstream 2.0kb downstream 4471 true scaffold00111: 56654-61124 Citrus sinensis
orange1.1g027625m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00111: 56654-58653 Citrus sinensis
orange1.1g027625m.g 5.0kb upstream 5.0kb upstream 7471 true scaffold00111: 58654-66124 Citrus sinensis
orange1.1g027625m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00111: 61125-66124 Citrus sinensis
orange1.1g027625m.g 5.0kb downstream 5.0kb downstream 7471 true scaffold00111: 53654-61124 Citrus sinensis
orange1.1g027625m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00111: 53654-58653 Citrus sinensis
orange1.1g027625m.g 10.0kb upstream 10.0kb upstream 12471 true scaffold00111: 58654-71124 Citrus sinensis
orange1.1g027625m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00111: 61125-71124 Citrus sinensis
orange1.1g027625m.g 10.0kb downstream 10.0kb downstream 12471 true scaffold00111: 48654-61124 Citrus sinensis
orange1.1g027625m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00111: 48654-58653 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350311 5266 SBM View MSA
124254461 5268 Malvidae View MSA
124073738 5270 Rosid View MSA
123747214 5271 Pentapetalae View MSA
122797628 5272 Eudicot View MSA
122045061 5273 Angiosperm View MSA
121345053 5274 Embryophyte View MSA
123428626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain