Gene : orange1.1g001917m.g C. sinensis v1.1
Defline:  (1 of 3) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  8
Name:  ? orange1.1g001917m.g Secondary Identifier:  ? PAC:18119425
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis GLYOXYLATE-BYPASS Citrus sinensis pathologic  
Csinensis PWY-5464 Citrus sinensis pathologic  
Csinensis PWY-561 Citrus sinensis pathologic  
Csinensis PWY-5690 Citrus sinensis pathologic  
Csinensis PWY-6549 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g001917m.g 0.5kb upstream 0.5kb upstream 8487 true scaffold00121: 76284-84770 Citrus sinensis
orange1.1g001917m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00121: 84271-84770 Citrus sinensis
orange1.1g001917m.g 0.5kb downstream 0.5kb downstream 8487 true scaffold00121: 75784-84270 Citrus sinensis
orange1.1g001917m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00121: 75784-76283 Citrus sinensis
orange1.1g001917m.g 1.0kb upstream 1.0kb upstream 8987 true scaffold00121: 76284-85270 Citrus sinensis
orange1.1g001917m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00121: 84271-85270 Citrus sinensis
orange1.1g001917m.g 1.0kb downstream 1.0kb downstream 8987 true scaffold00121: 75284-84270 Citrus sinensis
orange1.1g001917m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00121: 75284-76283 Citrus sinensis
orange1.1g001917m.g 2.0kb upstream 2.0kb upstream 9987 true scaffold00121: 76284-86270 Citrus sinensis
orange1.1g001917m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00121: 84271-86270 Citrus sinensis
orange1.1g001917m.g 2.0kb downstream 2.0kb downstream 9987 true scaffold00121: 74284-84270 Citrus sinensis
orange1.1g001917m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00121: 74284-76283 Citrus sinensis
orange1.1g001917m.g 5.0kb upstream 5.0kb upstream 12987 true scaffold00121: 76284-89270 Citrus sinensis
orange1.1g001917m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00121: 84271-89270 Citrus sinensis
orange1.1g001917m.g 5.0kb downstream 5.0kb downstream 12987 true scaffold00121: 71284-84270 Citrus sinensis
orange1.1g001917m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00121: 71284-76283 Citrus sinensis
orange1.1g001917m.g 10.0kb upstream 10.0kb upstream 17987 true scaffold00121: 76284-94270 Citrus sinensis
orange1.1g001917m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00121: 84271-94270 Citrus sinensis
orange1.1g001917m.g 10.0kb downstream 10.0kb downstream 17987 true scaffold00121: 66284-84270 Citrus sinensis
orange1.1g001917m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00121: 66284-76283 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350117 5266 SBM View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain