Gene : orange1.1g040181m.g C. sinensis v1.1
Defline:  (1 of 1) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1
Name:  ? orange1.1g040181m.g Secondary Identifier:  ? PAC:18119415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040181m.g 0.5kb upstream 0.5kb upstream 1109 true scaffold00121: 21765-22873 Citrus sinensis
orange1.1g040181m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00121: 22374-22873 Citrus sinensis
orange1.1g040181m.g 0.5kb downstream 0.5kb downstream 1109 true scaffold00121: 21265-22373 Citrus sinensis
orange1.1g040181m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00121: 21265-21764 Citrus sinensis
orange1.1g040181m.g 1.0kb upstream 1.0kb upstream 1609 true scaffold00121: 21765-23373 Citrus sinensis
orange1.1g040181m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00121: 22374-23373 Citrus sinensis
orange1.1g040181m.g 1.0kb downstream 1.0kb downstream 1609 true scaffold00121: 20765-22373 Citrus sinensis
orange1.1g040181m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00121: 20765-21764 Citrus sinensis
orange1.1g040181m.g 2.0kb upstream 2.0kb upstream 2609 true scaffold00121: 21765-24373 Citrus sinensis
orange1.1g040181m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00121: 22374-24373 Citrus sinensis
orange1.1g040181m.g 2.0kb downstream 2.0kb downstream 2609 true scaffold00121: 19765-22373 Citrus sinensis
orange1.1g040181m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00121: 19765-21764 Citrus sinensis
orange1.1g040181m.g 5.0kb upstream 5.0kb upstream 5609 true scaffold00121: 21765-27373 Citrus sinensis
orange1.1g040181m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00121: 22374-27373 Citrus sinensis
orange1.1g040181m.g 5.0kb downstream 5.0kb downstream 5609 true scaffold00121: 16765-22373 Citrus sinensis
orange1.1g040181m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00121: 16765-21764 Citrus sinensis
orange1.1g040181m.g 10.0kb upstream 10.0kb upstream 10609 true scaffold00121: 21765-32373 Citrus sinensis
orange1.1g040181m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00121: 22374-32373 Citrus sinensis
orange1.1g040181m.g 10.0kb downstream 10.0kb downstream 10609 true scaffold00121: 11765-22373 Citrus sinensis
orange1.1g040181m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00121: 11765-21764 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121529709 5273 Angiosperm Singleton cluster - no MSA
124329310 5266 SBM Singleton cluster - no MSA
124174563 5268 Malvidae Singleton cluster - no MSA
123897098 5270 Rosid Singleton cluster - no MSA
123478957 5271 Pentapetalae Singleton cluster - no MSA
122514209 5272 Eudicot Singleton cluster - no MSA
120802471 5274 Embryophyte Singleton cluster - no MSA
122844025 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain