Gene : orange1.1g025796m.g C. sinensis v1.1
Defline:  (1 of 2) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  62
Name:  ? orange1.1g025796m.g Secondary Identifier:  ? PAC:18094143
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6809 Citrus sinensis pathologic  
Csinensis PWY-695 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025796m.g 0.5kb upstream 0.5kb upstream 3454 true scaffold00071: 464123-467576 Citrus sinensis
orange1.1g025796m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00071: 464123-464622 Citrus sinensis
orange1.1g025796m.g 0.5kb downstream 0.5kb downstream 3454 true scaffold00071: 464623-468076 Citrus sinensis
orange1.1g025796m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00071: 467577-468076 Citrus sinensis
orange1.1g025796m.g 1.0kb upstream 1.0kb upstream 3954 true scaffold00071: 463623-467576 Citrus sinensis
orange1.1g025796m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00071: 463623-464622 Citrus sinensis
orange1.1g025796m.g 1.0kb downstream 1.0kb downstream 3954 true scaffold00071: 464623-468576 Citrus sinensis
orange1.1g025796m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00071: 467577-468576 Citrus sinensis
orange1.1g025796m.g 2.0kb upstream 2.0kb upstream 4954 true scaffold00071: 462623-467576 Citrus sinensis
orange1.1g025796m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00071: 462623-464622 Citrus sinensis
orange1.1g025796m.g 2.0kb downstream 2.0kb downstream 4954 true scaffold00071: 464623-469576 Citrus sinensis
orange1.1g025796m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00071: 467577-469576 Citrus sinensis
orange1.1g025796m.g 5.0kb upstream 5.0kb upstream 7954 true scaffold00071: 459623-467576 Citrus sinensis
orange1.1g025796m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00071: 459623-464622 Citrus sinensis
orange1.1g025796m.g 5.0kb downstream 5.0kb downstream 7954 true scaffold00071: 464623-472576 Citrus sinensis
orange1.1g025796m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00071: 467577-472576 Citrus sinensis
orange1.1g025796m.g 10.0kb upstream 10.0kb upstream 12954 true scaffold00071: 454623-467576 Citrus sinensis
orange1.1g025796m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00071: 454623-464622 Citrus sinensis
orange1.1g025796m.g 10.0kb downstream 10.0kb downstream 12954 true scaffold00071: 464623-477576 Citrus sinensis
orange1.1g025796m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00071: 467577-477576 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339377 5266 SBM View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain