Gene : orange1.1g039060m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  4
Name:  ? orange1.1g039060m.g Secondary Identifier:  ? PAC:18104197
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1001 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039060m.g 0.5kb upstream 0.5kb upstream 4885 true scaffold00048: 23114-27998 Citrus sinensis
orange1.1g039060m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00048: 23114-23613 Citrus sinensis
orange1.1g039060m.g 0.5kb downstream 0.5kb downstream 4885 true scaffold00048: 23614-28498 Citrus sinensis
orange1.1g039060m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00048: 27999-28498 Citrus sinensis
orange1.1g039060m.g 1.0kb upstream 1.0kb upstream 5385 true scaffold00048: 22614-27998 Citrus sinensis
orange1.1g039060m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00048: 22614-23613 Citrus sinensis
orange1.1g039060m.g 1.0kb downstream 1.0kb downstream 5385 true scaffold00048: 23614-28998 Citrus sinensis
orange1.1g039060m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00048: 27999-28998 Citrus sinensis
orange1.1g039060m.g 2.0kb upstream 2.0kb upstream 6385 true scaffold00048: 21614-27998 Citrus sinensis
orange1.1g039060m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00048: 21614-23613 Citrus sinensis
orange1.1g039060m.g 2.0kb downstream 2.0kb downstream 6385 true scaffold00048: 23614-29998 Citrus sinensis
orange1.1g039060m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00048: 27999-29998 Citrus sinensis
orange1.1g039060m.g 5.0kb upstream 5.0kb upstream 9385 true scaffold00048: 18614-27998 Citrus sinensis
orange1.1g039060m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00048: 18614-23613 Citrus sinensis
orange1.1g039060m.g 5.0kb downstream 5.0kb downstream 9385 true scaffold00048: 23614-32998 Citrus sinensis
orange1.1g039060m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00048: 27999-32998 Citrus sinensis
orange1.1g039060m.g 10.0kb upstream 10.0kb upstream 14385 true scaffold00048: 13614-27998 Citrus sinensis
orange1.1g039060m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00048: 13614-23613 Citrus sinensis
orange1.1g039060m.g 10.0kb downstream 10.0kb downstream 14385 true scaffold00048: 23614-37998 Citrus sinensis
orange1.1g039060m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00048: 27999-37998 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345098 5266 SBM View MSA
124251673 5268 Malvidae View MSA
124065342 5270 Rosid View MSA
123753627 5271 Pentapetalae View MSA
122788990 5272 Eudicot View MSA
122047016 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain