Gene : orange1.1g011872m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  12
Name:  ? orange1.1g011872m.g Secondary Identifier:  ? PAC:18105222
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5068 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g011872m.g 0.5kb upstream 0.5kb upstream 7830 true scaffold00109: 132970-140799 Citrus sinensis
orange1.1g011872m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00109: 132970-133469 Citrus sinensis
orange1.1g011872m.g 0.5kb downstream 0.5kb downstream 7830 true scaffold00109: 133470-141299 Citrus sinensis
orange1.1g011872m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00109: 140800-141299 Citrus sinensis
orange1.1g011872m.g 1.0kb upstream 1.0kb upstream 8330 true scaffold00109: 132470-140799 Citrus sinensis
orange1.1g011872m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00109: 132470-133469 Citrus sinensis
orange1.1g011872m.g 1.0kb downstream 1.0kb downstream 8330 true scaffold00109: 133470-141799 Citrus sinensis
orange1.1g011872m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00109: 140800-141799 Citrus sinensis
orange1.1g011872m.g 2.0kb upstream 2.0kb upstream 9330 true scaffold00109: 131470-140799 Citrus sinensis
orange1.1g011872m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00109: 131470-133469 Citrus sinensis
orange1.1g011872m.g 2.0kb downstream 2.0kb downstream 9330 true scaffold00109: 133470-142799 Citrus sinensis
orange1.1g011872m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00109: 140800-142799 Citrus sinensis
orange1.1g011872m.g 5.0kb upstream 5.0kb upstream 12330 true scaffold00109: 128470-140799 Citrus sinensis
orange1.1g011872m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00109: 128470-133469 Citrus sinensis
orange1.1g011872m.g 5.0kb downstream 5.0kb downstream 12330 true scaffold00109: 133470-145799 Citrus sinensis
orange1.1g011872m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00109: 140800-145799 Citrus sinensis
orange1.1g011872m.g 10.0kb upstream 10.0kb upstream 17330 true scaffold00109: 123470-140799 Citrus sinensis
orange1.1g011872m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00109: 123470-133469 Citrus sinensis
orange1.1g011872m.g 10.0kb downstream 10.0kb downstream 17330 true scaffold00109: 133470-150799 Citrus sinensis
orange1.1g011872m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00109: 140800-150799 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343484 5266 SBM View MSA
124240416 5268 Malvidae View MSA
124061681 5270 Rosid View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain