Gene : orange1.1g035488m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  13
Name:  ? orange1.1g035488m.g Secondary Identifier:  ? PAC:18105236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWYDQC-4 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g035488m.g 0.5kb upstream 0.5kb upstream 2207 true scaffold00109: 146739-148945 Citrus sinensis
orange1.1g035488m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00109: 148446-148945 Citrus sinensis
orange1.1g035488m.g 0.5kb downstream 0.5kb downstream 2207 true scaffold00109: 146239-148445 Citrus sinensis
orange1.1g035488m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00109: 146239-146738 Citrus sinensis
orange1.1g035488m.g 1.0kb upstream 1.0kb upstream 2707 true scaffold00109: 146739-149445 Citrus sinensis
orange1.1g035488m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00109: 148446-149445 Citrus sinensis
orange1.1g035488m.g 1.0kb downstream 1.0kb downstream 2707 true scaffold00109: 145739-148445 Citrus sinensis
orange1.1g035488m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00109: 145739-146738 Citrus sinensis
orange1.1g035488m.g 2.0kb upstream 2.0kb upstream 3707 true scaffold00109: 146739-150445 Citrus sinensis
orange1.1g035488m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00109: 148446-150445 Citrus sinensis
orange1.1g035488m.g 2.0kb downstream 2.0kb downstream 3707 true scaffold00109: 144739-148445 Citrus sinensis
orange1.1g035488m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00109: 144739-146738 Citrus sinensis
orange1.1g035488m.g 5.0kb upstream 5.0kb upstream 6707 true scaffold00109: 146739-153445 Citrus sinensis
orange1.1g035488m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00109: 148446-153445 Citrus sinensis
orange1.1g035488m.g 5.0kb downstream 5.0kb downstream 6707 true scaffold00109: 141739-148445 Citrus sinensis
orange1.1g035488m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00109: 141739-146738 Citrus sinensis
orange1.1g035488m.g 10.0kb upstream 10.0kb upstream 11707 true scaffold00109: 146739-158445 Citrus sinensis
orange1.1g035488m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00109: 148446-158445 Citrus sinensis
orange1.1g035488m.g 10.0kb downstream 10.0kb downstream 11707 true scaffold00109: 136739-148445 Citrus sinensis
orange1.1g035488m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00109: 136739-146738 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337089 5266 SBM View MSA
124242523 5268 Malvidae View MSA
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain