Gene : orange1.1g039340m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR22951:SF26 - CLATHRIN COAT ASSEMBLY PROTEIN AP180 Genomic Order:  23
Name:  ? orange1.1g039340m.g Secondary Identifier:  ? PAC:18106623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039340m.g 0.5kb upstream 0.5kb upstream 2273 true scaffold00126: 345114-347386 Citrus sinensis
orange1.1g039340m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00126: 345114-345613 Citrus sinensis
orange1.1g039340m.g 0.5kb downstream 0.5kb downstream 2273 true scaffold00126: 345614-347886 Citrus sinensis
orange1.1g039340m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00126: 347387-347886 Citrus sinensis
orange1.1g039340m.g 1.0kb upstream 1.0kb upstream 2773 true scaffold00126: 344614-347386 Citrus sinensis
orange1.1g039340m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00126: 344614-345613 Citrus sinensis
orange1.1g039340m.g 1.0kb downstream 1.0kb downstream 2773 true scaffold00126: 345614-348386 Citrus sinensis
orange1.1g039340m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00126: 347387-348386 Citrus sinensis
orange1.1g039340m.g 2.0kb upstream 2.0kb upstream 3773 true scaffold00126: 343614-347386 Citrus sinensis
orange1.1g039340m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00126: 343614-345613 Citrus sinensis
orange1.1g039340m.g 2.0kb downstream 2.0kb downstream 3773 true scaffold00126: 345614-349386 Citrus sinensis
orange1.1g039340m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00126: 347387-349386 Citrus sinensis
orange1.1g039340m.g 5.0kb upstream 5.0kb upstream 6773 true scaffold00126: 340614-347386 Citrus sinensis
orange1.1g039340m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00126: 340614-345613 Citrus sinensis
orange1.1g039340m.g 5.0kb downstream 5.0kb downstream 6773 true scaffold00126: 345614-352386 Citrus sinensis
orange1.1g039340m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00126: 347387-352386 Citrus sinensis
orange1.1g039340m.g 10.0kb upstream 10.0kb upstream 11773 true scaffold00126: 335614-347386 Citrus sinensis
orange1.1g039340m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00126: 335614-345613 Citrus sinensis
orange1.1g039340m.g 10.0kb downstream 10.0kb downstream 11773 true scaffold00126: 345614-357386 Citrus sinensis
orange1.1g039340m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00126: 347387-357386 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124336700 5266 SBM View MSA
124251514 5268 Malvidae View MSA
124064845 5270 Rosid View MSA
123748720 5271 Pentapetalae View MSA
122791986 5272 Eudicot View MSA
122050883 5273 Angiosperm View MSA
121351758 5274 Embryophyte View MSA
123382309 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain