Gene : 408398 S. moellendorffii v1.0
Defline:  (1 of 2) 1.17.1.2 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / HMBPP reductase Genomic Order:  107
Name:  ? 408398 Secondary Identifier:  ? PAC:15421147
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-7560 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
408398 0.5kb upstream 0.5kb upstream 2466 true scaffold_8: 2371676-2374141 Selaginella moellendorffii
408398 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2371676-2372175 Selaginella moellendorffii
408398 0.5kb downstream 0.5kb downstream 2466 true scaffold_8: 2372176-2374641 Selaginella moellendorffii
408398 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2374142-2374641 Selaginella moellendorffii
408398 1.0kb upstream 1.0kb upstream 2966 true scaffold_8: 2371176-2374141 Selaginella moellendorffii
408398 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2371176-2372175 Selaginella moellendorffii
408398 1.0kb downstream 1.0kb downstream 2966 true scaffold_8: 2372176-2375141 Selaginella moellendorffii
408398 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2374142-2375141 Selaginella moellendorffii
408398 2.0kb upstream 2.0kb upstream 3966 true scaffold_8: 2370176-2374141 Selaginella moellendorffii
408398 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2370176-2372175 Selaginella moellendorffii
408398 2.0kb downstream 2.0kb downstream 3966 true scaffold_8: 2372176-2376141 Selaginella moellendorffii
408398 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2374142-2376141 Selaginella moellendorffii
408398 5.0kb upstream 5.0kb upstream 6966 true scaffold_8: 2367176-2374141 Selaginella moellendorffii
408398 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2367176-2372175 Selaginella moellendorffii
408398 5.0kb downstream 5.0kb downstream 6966 true scaffold_8: 2372176-2379141 Selaginella moellendorffii
408398 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2374142-2379141 Selaginella moellendorffii
408398 10.0kb upstream 10.0kb upstream 11966 true scaffold_8: 2362176-2374141 Selaginella moellendorffii
408398 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2362176-2372175 Selaginella moellendorffii
408398 10.0kb downstream 10.0kb downstream 11966 true scaffold_8: 2372176-2384141 Selaginella moellendorffii
408398 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2374142-2384141 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121322013 5274 Embryophyte Singleton cluster - no MSA
123359086 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain