Gene : Eucgr.A00110 E. grandis v2.0
Defline:  (1 of 2) PTHR13077:SF6 - 15 KDA SELENOPROTEIN Genomic Order:  113
Name:  ? Eucgr.A00110 Secondary Identifier:  ? PAC:32046824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00110 0.5kb upstream 0.5kb upstream 3153 true Chr01: 2077964-2081116 Eucalyptus grandis
Eucgr.A00110 0.5kb upstream 0.5kb upstream 500 false Chr01: 2080617-2081116 Eucalyptus grandis
Eucgr.A00110 0.5kb downstream 0.5kb downstream 3153 true Chr01: 2077464-2080616 Eucalyptus grandis
Eucgr.A00110 0.5kb downstream 0.5kb downstream 500 false Chr01: 2077464-2077963 Eucalyptus grandis
Eucgr.A00110 1.0kb upstream 1.0kb upstream 3653 true Chr01: 2077964-2081616 Eucalyptus grandis
Eucgr.A00110 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2080617-2081616 Eucalyptus grandis
Eucgr.A00110 1.0kb downstream 1.0kb downstream 3653 true Chr01: 2076964-2080616 Eucalyptus grandis
Eucgr.A00110 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2076964-2077963 Eucalyptus grandis
Eucgr.A00110 2.0kb upstream 2.0kb upstream 4653 true Chr01: 2077964-2082616 Eucalyptus grandis
Eucgr.A00110 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2080617-2082616 Eucalyptus grandis
Eucgr.A00110 2.0kb downstream 2.0kb downstream 4653 true Chr01: 2075964-2080616 Eucalyptus grandis
Eucgr.A00110 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2075964-2077963 Eucalyptus grandis
Eucgr.A00110 5.0kb upstream 5.0kb upstream 7653 true Chr01: 2077964-2085616 Eucalyptus grandis
Eucgr.A00110 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2080617-2085616 Eucalyptus grandis
Eucgr.A00110 5.0kb downstream 5.0kb downstream 7653 true Chr01: 2072964-2080616 Eucalyptus grandis
Eucgr.A00110 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2072964-2077963 Eucalyptus grandis
Eucgr.A00110 10.0kb upstream 10.0kb upstream 12653 true Chr01: 2077964-2090616 Eucalyptus grandis
Eucgr.A00110 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2080617-2090616 Eucalyptus grandis
Eucgr.A00110 10.0kb downstream 10.0kb downstream 12653 true Chr01: 2067964-2080616 Eucalyptus grandis
Eucgr.A00110 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2067964-2077963 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066908 5270 Rosid View MSA
123736516 5271 Pentapetalae View MSA
122788983 5272 Eudicot View MSA
122044015 5273 Angiosperm View MSA
121346057 5274 Embryophyte View MSA
123424520 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.7351 0.0 88.9575 High  
cufflinks 1.53244 0.0 99.6168   Low
cufflinks 30.6904 0.0 102.697 High  
cufflinks 12.9039 0.0 75.4901    
cufflinks 25.3784 0.0 99.0009    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain