Gene : Eucgr.A00059 E. grandis v2.0
Defline:  (1 of 7) PTHR11097:SF9 - EXOSOME COMPLEX COMPONENT RRP43 Genomic Order:  69
Name:  ? Eucgr.A00059 Secondary Identifier:  ? PAC:32048269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00059 0.5kb upstream 0.5kb upstream 4785 true Chr01: 1303348-1308132 Eucalyptus grandis
Eucgr.A00059 0.5kb upstream 0.5kb upstream 500 false Chr01: 1307633-1308132 Eucalyptus grandis
Eucgr.A00059 0.5kb downstream 0.5kb downstream 4785 true Chr01: 1302848-1307632 Eucalyptus grandis
Eucgr.A00059 0.5kb downstream 0.5kb downstream 500 false Chr01: 1302848-1303347 Eucalyptus grandis
Eucgr.A00059 1.0kb upstream 1.0kb upstream 5285 true Chr01: 1303348-1308632 Eucalyptus grandis
Eucgr.A00059 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1307633-1308632 Eucalyptus grandis
Eucgr.A00059 1.0kb downstream 1.0kb downstream 5285 true Chr01: 1302348-1307632 Eucalyptus grandis
Eucgr.A00059 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1302348-1303347 Eucalyptus grandis
Eucgr.A00059 2.0kb upstream 2.0kb upstream 6285 true Chr01: 1303348-1309632 Eucalyptus grandis
Eucgr.A00059 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1307633-1309632 Eucalyptus grandis
Eucgr.A00059 2.0kb downstream 2.0kb downstream 6285 true Chr01: 1301348-1307632 Eucalyptus grandis
Eucgr.A00059 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1301348-1303347 Eucalyptus grandis
Eucgr.A00059 5.0kb upstream 5.0kb upstream 9285 true Chr01: 1303348-1312632 Eucalyptus grandis
Eucgr.A00059 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1307633-1312632 Eucalyptus grandis
Eucgr.A00059 5.0kb downstream 5.0kb downstream 9285 true Chr01: 1298348-1307632 Eucalyptus grandis
Eucgr.A00059 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1298348-1303347 Eucalyptus grandis
Eucgr.A00059 10.0kb upstream 10.0kb upstream 14285 true Chr01: 1303348-1317632 Eucalyptus grandis
Eucgr.A00059 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1307633-1317632 Eucalyptus grandis
Eucgr.A00059 10.0kb downstream 10.0kb downstream 14285 true Chr01: 1293348-1307632 Eucalyptus grandis
Eucgr.A00059 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1293348-1303347 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041221 5273 Angiosperm View MSA
124065383 5270 Rosid View MSA
123740592 5271 Pentapetalae View MSA
122791170 5272 Eudicot View MSA
121346499 5274 Embryophyte View MSA
123425842 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.10942 0.0 13.4054    
cufflinks 5.19644 0.0 13.4997    
cufflinks 5.77457 0.0 14.9221   High
cufflinks 4.48678 0.0 11.8342    
cufflinks 4.21579 0.0 11.2411    
cufflinks 3.02078 0.0 8.38156   Low

0 Strain