Gene : Eucgr.A00058 E. grandis v2.0
Defline:  (1 of 4) PTHR24349:SF160 - CALCIUM-DEPENDENT PROTEIN KINASE 24 Genomic Order:  68
Name:  ? Eucgr.A00058 Secondary Identifier:  ? PAC:32045988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00058 0.5kb upstream 0.5kb upstream 3268 true Chr01: 1298946-1302213 Eucalyptus grandis
Eucgr.A00058 0.5kb upstream 0.5kb upstream 500 false Chr01: 1301714-1302213 Eucalyptus grandis
Eucgr.A00058 0.5kb downstream 0.5kb downstream 3268 true Chr01: 1298446-1301713 Eucalyptus grandis
Eucgr.A00058 0.5kb downstream 0.5kb downstream 500 false Chr01: 1298446-1298945 Eucalyptus grandis
Eucgr.A00058 1.0kb upstream 1.0kb upstream 3768 true Chr01: 1298946-1302713 Eucalyptus grandis
Eucgr.A00058 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1301714-1302713 Eucalyptus grandis
Eucgr.A00058 1.0kb downstream 1.0kb downstream 3768 true Chr01: 1297946-1301713 Eucalyptus grandis
Eucgr.A00058 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1297946-1298945 Eucalyptus grandis
Eucgr.A00058 2.0kb upstream 2.0kb upstream 4768 true Chr01: 1298946-1303713 Eucalyptus grandis
Eucgr.A00058 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1301714-1303713 Eucalyptus grandis
Eucgr.A00058 2.0kb downstream 2.0kb downstream 4768 true Chr01: 1296946-1301713 Eucalyptus grandis
Eucgr.A00058 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1296946-1298945 Eucalyptus grandis
Eucgr.A00058 5.0kb upstream 5.0kb upstream 7768 true Chr01: 1298946-1306713 Eucalyptus grandis
Eucgr.A00058 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1301714-1306713 Eucalyptus grandis
Eucgr.A00058 5.0kb downstream 5.0kb downstream 7768 true Chr01: 1293946-1301713 Eucalyptus grandis
Eucgr.A00058 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1293946-1298945 Eucalyptus grandis
Eucgr.A00058 10.0kb upstream 10.0kb upstream 12768 true Chr01: 1298946-1311713 Eucalyptus grandis
Eucgr.A00058 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1301714-1311713 Eucalyptus grandis
Eucgr.A00058 10.0kb downstream 10.0kb downstream 12768 true Chr01: 1288946-1301713 Eucalyptus grandis
Eucgr.A00058 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1288946-1298945 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779275 5273 Angiosperm View MSA
124066973 5270 Rosid View MSA
123741772 5271 Pentapetalae View MSA
122770123 5272 Eudicot View MSA
121050948 5274 Embryophyte View MSA
123091056 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.504063 0.0 1.5972 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.101296 0.0 0.398795 Low  
cufflinks 0.0507234 0.0 0.257201 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.46887 0.0 1.50792 Low  

0 Strain