Gene : Eucgr.A00038 E. grandis v2.0
Genomic Order:  134 Name:  ? Eucgr.A00038
Secondary Identifier:  ? PAC:32045966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00038 0.5kb upstream 0.5kb upstream 5607 true Chr01: 2446698-2452304 Eucalyptus grandis
Eucgr.A00038 0.5kb upstream 0.5kb upstream 500 false Chr01: 2451805-2452304 Eucalyptus grandis
Eucgr.A00038 0.5kb downstream 0.5kb downstream 5607 true Chr01: 2446198-2451804 Eucalyptus grandis
Eucgr.A00038 0.5kb downstream 0.5kb downstream 500 false Chr01: 2446198-2446697 Eucalyptus grandis
Eucgr.A00038 1.0kb upstream 1.0kb upstream 6107 true Chr01: 2446698-2452804 Eucalyptus grandis
Eucgr.A00038 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2451805-2452804 Eucalyptus grandis
Eucgr.A00038 1.0kb downstream 1.0kb downstream 6107 true Chr01: 2445698-2451804 Eucalyptus grandis
Eucgr.A00038 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2445698-2446697 Eucalyptus grandis
Eucgr.A00038 2.0kb upstream 2.0kb upstream 7107 true Chr01: 2446698-2453804 Eucalyptus grandis
Eucgr.A00038 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2451805-2453804 Eucalyptus grandis
Eucgr.A00038 2.0kb downstream 2.0kb downstream 7107 true Chr01: 2444698-2451804 Eucalyptus grandis
Eucgr.A00038 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2444698-2446697 Eucalyptus grandis
Eucgr.A00038 5.0kb upstream 5.0kb upstream 10107 true Chr01: 2446698-2456804 Eucalyptus grandis
Eucgr.A00038 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2451805-2456804 Eucalyptus grandis
Eucgr.A00038 5.0kb downstream 5.0kb downstream 10107 true Chr01: 2441698-2451804 Eucalyptus grandis
Eucgr.A00038 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2441698-2446697 Eucalyptus grandis
Eucgr.A00038 10.0kb upstream 10.0kb upstream 15107 true Chr01: 2446698-2461804 Eucalyptus grandis
Eucgr.A00038 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2451805-2461804 Eucalyptus grandis
Eucgr.A00038 10.0kb downstream 10.0kb downstream 15107 true Chr01: 2436698-2451804 Eucalyptus grandis
Eucgr.A00038 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2436698-2446697 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061999 5270 Rosid View MSA
123741146 5271 Pentapetalae View MSA
122770010 5272 Eudicot View MSA
122046829 5273 Angiosperm View MSA
121348564 5274 Embryophyte View MSA
123380915 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73398 0.0 8.89707    
cufflinks 2.22423 0.0 5.53265    
cufflinks 3.5429 0.0 8.43429    
cufflinks 4.5716 0.0 10.6045    
cufflinks 1.30177 0.0 3.43055   Low
cufflinks 6.90427 0.0 15.7438   High

0 Strain