Gene : Eucgr.A00039 E. grandis v2.0
Defline:  (1 of 4) PTHR19332 - PEROXISOMAL MEMBRANE PROTEIN PEX13 Genomic Order:  133
Name:  ? Eucgr.A00039 Secondary Identifier:  ? PAC:32048595
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00039 0.5kb upstream 0.5kb upstream 4523 true Chr01: 2441424-2445946 Eucalyptus grandis
Eucgr.A00039 0.5kb upstream 0.5kb upstream 500 false Chr01: 2441424-2441923 Eucalyptus grandis
Eucgr.A00039 0.5kb downstream 0.5kb downstream 4523 true Chr01: 2441924-2446446 Eucalyptus grandis
Eucgr.A00039 0.5kb downstream 0.5kb downstream 500 false Chr01: 2445947-2446446 Eucalyptus grandis
Eucgr.A00039 1.0kb upstream 1.0kb upstream 5023 true Chr01: 2440924-2445946 Eucalyptus grandis
Eucgr.A00039 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2440924-2441923 Eucalyptus grandis
Eucgr.A00039 1.0kb downstream 1.0kb downstream 5023 true Chr01: 2441924-2446946 Eucalyptus grandis
Eucgr.A00039 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2445947-2446946 Eucalyptus grandis
Eucgr.A00039 2.0kb upstream 2.0kb upstream 6023 true Chr01: 2439924-2445946 Eucalyptus grandis
Eucgr.A00039 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2439924-2441923 Eucalyptus grandis
Eucgr.A00039 2.0kb downstream 2.0kb downstream 6023 true Chr01: 2441924-2447946 Eucalyptus grandis
Eucgr.A00039 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2445947-2447946 Eucalyptus grandis
Eucgr.A00039 5.0kb upstream 5.0kb upstream 9023 true Chr01: 2436924-2445946 Eucalyptus grandis
Eucgr.A00039 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2436924-2441923 Eucalyptus grandis
Eucgr.A00039 5.0kb downstream 5.0kb downstream 9023 true Chr01: 2441924-2450946 Eucalyptus grandis
Eucgr.A00039 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2445947-2450946 Eucalyptus grandis
Eucgr.A00039 10.0kb upstream 10.0kb upstream 14023 true Chr01: 2431924-2445946 Eucalyptus grandis
Eucgr.A00039 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2431924-2441923 Eucalyptus grandis
Eucgr.A00039 10.0kb downstream 10.0kb downstream 14023 true Chr01: 2441924-2455946 Eucalyptus grandis
Eucgr.A00039 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2445947-2455946 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050988 5270 Rosid View MSA
123738456 5271 Pentapetalae View MSA
122790509 5272 Eudicot View MSA
122050338 5273 Angiosperm View MSA
121346034 5274 Embryophyte View MSA
123428810 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.5796 0.0 77.818 High Low
cufflinks 178.642 0.0 581.906 High  
cufflinks 49.4623 0.0 163.356 High  
cufflinks 223.103 0.0 823.247 High High
cufflinks 162.319 0.0 577.689 High  
cufflinks 37.7499 0.0 84.7728 High  

0 Strain