Gene : Eucgr.A00035 E. grandis v2.0
Defline:  (1 of 1) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Genomic Order:  137
Name:  ? Eucgr.A00035 Secondary Identifier:  ? PAC:32047258
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00035 0.5kb upstream 0.5kb upstream 9006 true Chr01: 2475851-2484856 Eucalyptus grandis
Eucgr.A00035 0.5kb upstream 0.5kb upstream 500 false Chr01: 2475851-2476350 Eucalyptus grandis
Eucgr.A00035 0.5kb downstream 0.5kb downstream 9006 true Chr01: 2476351-2485356 Eucalyptus grandis
Eucgr.A00035 0.5kb downstream 0.5kb downstream 500 false Chr01: 2484857-2485356 Eucalyptus grandis
Eucgr.A00035 1.0kb upstream 1.0kb upstream 9506 true Chr01: 2475351-2484856 Eucalyptus grandis
Eucgr.A00035 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2475351-2476350 Eucalyptus grandis
Eucgr.A00035 1.0kb downstream 1.0kb downstream 9506 true Chr01: 2476351-2485856 Eucalyptus grandis
Eucgr.A00035 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2484857-2485856 Eucalyptus grandis
Eucgr.A00035 2.0kb upstream 2.0kb upstream 10506 true Chr01: 2474351-2484856 Eucalyptus grandis
Eucgr.A00035 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2474351-2476350 Eucalyptus grandis
Eucgr.A00035 2.0kb downstream 2.0kb downstream 10506 true Chr01: 2476351-2486856 Eucalyptus grandis
Eucgr.A00035 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2484857-2486856 Eucalyptus grandis
Eucgr.A00035 5.0kb upstream 5.0kb upstream 13506 true Chr01: 2471351-2484856 Eucalyptus grandis
Eucgr.A00035 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2471351-2476350 Eucalyptus grandis
Eucgr.A00035 5.0kb downstream 5.0kb downstream 13506 true Chr01: 2476351-2489856 Eucalyptus grandis
Eucgr.A00035 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2484857-2489856 Eucalyptus grandis
Eucgr.A00035 10.0kb upstream 10.0kb upstream 18506 true Chr01: 2466351-2484856 Eucalyptus grandis
Eucgr.A00035 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2466351-2476350 Eucalyptus grandis
Eucgr.A00035 10.0kb downstream 10.0kb downstream 18506 true Chr01: 2476351-2494856 Eucalyptus grandis
Eucgr.A00035 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2484857-2494856 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2317 0.0 32.0455    
cufflinks 20.848 0.0 46.2523    
cufflinks 14.7702 0.0 33.1635    
cufflinks 33.2227 0.0 73.5136   High
cufflinks 16.6121 0.0 37.1243    
cufflinks 12.3088 0.0 28.0061   Low

0 Strain