Gene : Eucgr.A00036 E. grandis v2.0
Defline:  (1 of 1) PTHR12858:SF2 - RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOG Genomic Order:  136
Name:  ? Eucgr.A00036 Secondary Identifier:  ? PAC:32046292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00036 0.5kb upstream 0.5kb upstream 13229 true Chr01: 2461621-2474849 Eucalyptus grandis
Eucgr.A00036 0.5kb upstream 0.5kb upstream 500 false Chr01: 2474350-2474849 Eucalyptus grandis
Eucgr.A00036 0.5kb downstream 0.5kb downstream 13229 true Chr01: 2461121-2474349 Eucalyptus grandis
Eucgr.A00036 0.5kb downstream 0.5kb downstream 500 false Chr01: 2461121-2461620 Eucalyptus grandis
Eucgr.A00036 1.0kb upstream 1.0kb upstream 13729 true Chr01: 2461621-2475349 Eucalyptus grandis
Eucgr.A00036 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2474350-2475349 Eucalyptus grandis
Eucgr.A00036 1.0kb downstream 1.0kb downstream 13729 true Chr01: 2460621-2474349 Eucalyptus grandis
Eucgr.A00036 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2460621-2461620 Eucalyptus grandis
Eucgr.A00036 2.0kb upstream 2.0kb upstream 14729 true Chr01: 2461621-2476349 Eucalyptus grandis
Eucgr.A00036 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2474350-2476349 Eucalyptus grandis
Eucgr.A00036 2.0kb downstream 2.0kb downstream 14729 true Chr01: 2459621-2474349 Eucalyptus grandis
Eucgr.A00036 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2459621-2461620 Eucalyptus grandis
Eucgr.A00036 5.0kb upstream 5.0kb upstream 17729 true Chr01: 2461621-2479349 Eucalyptus grandis
Eucgr.A00036 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2474350-2479349 Eucalyptus grandis
Eucgr.A00036 5.0kb downstream 5.0kb downstream 17729 true Chr01: 2456621-2474349 Eucalyptus grandis
Eucgr.A00036 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2456621-2461620 Eucalyptus grandis
Eucgr.A00036 10.0kb upstream 10.0kb upstream 22729 true Chr01: 2461621-2484349 Eucalyptus grandis
Eucgr.A00036 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2474350-2484349 Eucalyptus grandis
Eucgr.A00036 10.0kb downstream 10.0kb downstream 22729 true Chr01: 2451621-2474349 Eucalyptus grandis
Eucgr.A00036 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2451621-2461620 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068054 5270 Rosid View MSA
123746170 5271 Pentapetalae View MSA
122788558 5272 Eudicot View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.92232 0.0 17.5537    
cufflinks 3.325 0.0 7.64421   Low
cufflinks 9.00705 0.0 19.9224    
cufflinks 6.73869 0.0 14.9543    
cufflinks 3.86346 0.0 8.79203   Low
cufflinks 9.55058 0.0 21.1277    

0 Strain