Gene : Eucgr.A00001 E. grandis v2.0
Defline:  (1 of 1) KOG0721 - Molecular chaperone (DnaJ superfamily) Genomic Order:  162
Name:  ? Eucgr.A00001 Secondary Identifier:  ? PAC:32049109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00001 0.5kb upstream 0.5kb upstream 5827 true Chr01: 2787014-2792840 Eucalyptus grandis
Eucgr.A00001 0.5kb upstream 0.5kb upstream 500 false Chr01: 2792341-2792840 Eucalyptus grandis
Eucgr.A00001 0.5kb downstream 0.5kb downstream 5827 true Chr01: 2786514-2792340 Eucalyptus grandis
Eucgr.A00001 0.5kb downstream 0.5kb downstream 500 false Chr01: 2786514-2787013 Eucalyptus grandis
Eucgr.A00001 1.0kb upstream 1.0kb upstream 6327 true Chr01: 2787014-2793340 Eucalyptus grandis
Eucgr.A00001 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2792341-2793340 Eucalyptus grandis
Eucgr.A00001 1.0kb downstream 1.0kb downstream 6327 true Chr01: 2786014-2792340 Eucalyptus grandis
Eucgr.A00001 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2786014-2787013 Eucalyptus grandis
Eucgr.A00001 2.0kb upstream 2.0kb upstream 7327 true Chr01: 2787014-2794340 Eucalyptus grandis
Eucgr.A00001 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2792341-2794340 Eucalyptus grandis
Eucgr.A00001 2.0kb downstream 2.0kb downstream 7327 true Chr01: 2785014-2792340 Eucalyptus grandis
Eucgr.A00001 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2785014-2787013 Eucalyptus grandis
Eucgr.A00001 5.0kb upstream 5.0kb upstream 10327 true Chr01: 2787014-2797340 Eucalyptus grandis
Eucgr.A00001 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2792341-2797340 Eucalyptus grandis
Eucgr.A00001 5.0kb downstream 5.0kb downstream 10327 true Chr01: 2782014-2792340 Eucalyptus grandis
Eucgr.A00001 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2782014-2787013 Eucalyptus grandis
Eucgr.A00001 10.0kb upstream 10.0kb upstream 15327 true Chr01: 2787014-2802340 Eucalyptus grandis
Eucgr.A00001 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2792341-2802340 Eucalyptus grandis
Eucgr.A00001 10.0kb downstream 10.0kb downstream 15327 true Chr01: 2777014-2792340 Eucalyptus grandis
Eucgr.A00001 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2777014-2787013 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068624 5270 Rosid View MSA
123750778 5271 Pentapetalae View MSA
122790438 5272 Eudicot View MSA
122042365 5273 Angiosperm View MSA
121347145 5274 Embryophyte View MSA
123426630 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7339 0.0 68.0716 High Low
cufflinks 34.2606 0.0 76.1189    
cufflinks 33.4297 0.0 74.1734 High  
cufflinks 41.906 0.0 93.6773 High High
cufflinks 35.2954 0.0 78.3921    
cufflinks 37.2632 0.0 82.7539 High  

0 Strain