Gene : Eucgr.A00006 E. grandis v2.0
Defline:  (1 of 1) PTHR10133:SF22 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  157
Name:  ? Eucgr.A00006 Secondary Identifier:  ? PAC:32046179
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00006 0.5kb upstream 0.5kb upstream 17323 true Chr01: 2732189-2749511 Eucalyptus grandis
Eucgr.A00006 0.5kb upstream 0.5kb upstream 500 false Chr01: 2749012-2749511 Eucalyptus grandis
Eucgr.A00006 0.5kb downstream 0.5kb downstream 17323 true Chr01: 2731689-2749011 Eucalyptus grandis
Eucgr.A00006 0.5kb downstream 0.5kb downstream 500 false Chr01: 2731689-2732188 Eucalyptus grandis
Eucgr.A00006 1.0kb upstream 1.0kb upstream 17823 true Chr01: 2732189-2750011 Eucalyptus grandis
Eucgr.A00006 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2749012-2750011 Eucalyptus grandis
Eucgr.A00006 1.0kb downstream 1.0kb downstream 17823 true Chr01: 2731189-2749011 Eucalyptus grandis
Eucgr.A00006 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2731189-2732188 Eucalyptus grandis
Eucgr.A00006 2.0kb upstream 2.0kb upstream 18823 true Chr01: 2732189-2751011 Eucalyptus grandis
Eucgr.A00006 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2749012-2751011 Eucalyptus grandis
Eucgr.A00006 2.0kb downstream 2.0kb downstream 18823 true Chr01: 2730189-2749011 Eucalyptus grandis
Eucgr.A00006 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2730189-2732188 Eucalyptus grandis
Eucgr.A00006 5.0kb upstream 5.0kb upstream 21823 true Chr01: 2732189-2754011 Eucalyptus grandis
Eucgr.A00006 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2749012-2754011 Eucalyptus grandis
Eucgr.A00006 5.0kb downstream 5.0kb downstream 21823 true Chr01: 2727189-2749011 Eucalyptus grandis
Eucgr.A00006 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2727189-2732188 Eucalyptus grandis
Eucgr.A00006 10.0kb upstream 10.0kb upstream 26823 true Chr01: 2732189-2759011 Eucalyptus grandis
Eucgr.A00006 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2749012-2759011 Eucalyptus grandis
Eucgr.A00006 10.0kb downstream 10.0kb downstream 26823 true Chr01: 2722189-2749011 Eucalyptus grandis
Eucgr.A00006 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2722189-2732188 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063709 5270 Rosid View MSA
123739108 5271 Pentapetalae View MSA
122787577 5272 Eudicot View MSA
122042646 5273 Angiosperm View MSA
121346899 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.50321 0.0 17.4673    
cufflinks 6.12268 0.0 14.4905    
cufflinks 9.07138 0.0 21.826   High
cufflinks 5.99661 0.0 14.2079    
cufflinks 4.85479 0.0 11.6536   Low
cufflinks 5.25263 0.0 12.5573    

0 Strain