Gene : Eucgr.A00708 E. grandis v2.0
Defline:  (1 of 6) 2.1.2.3 - Phosphoribosylaminoimidazolecarboxamide formyltransferase / Aminoimidazolecarboxamide ribonucleotide transformylase Genomic Order:  695
Name:  ? Eucgr.A00708 Secondary Identifier:  ? PAC:32046522
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6124 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00708 0.5kb upstream 0.5kb upstream 5980 true Chr01: 14034245-14040224 Eucalyptus grandis
Eucgr.A00708 0.5kb upstream 0.5kb upstream 500 false Chr01: 14039725-14040224 Eucalyptus grandis
Eucgr.A00708 0.5kb downstream 0.5kb downstream 5980 true Chr01: 14033745-14039724 Eucalyptus grandis
Eucgr.A00708 0.5kb downstream 0.5kb downstream 500 false Chr01: 14033745-14034244 Eucalyptus grandis
Eucgr.A00708 1.0kb upstream 1.0kb upstream 6480 true Chr01: 14034245-14040724 Eucalyptus grandis
Eucgr.A00708 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14039725-14040724 Eucalyptus grandis
Eucgr.A00708 1.0kb downstream 1.0kb downstream 6480 true Chr01: 14033245-14039724 Eucalyptus grandis
Eucgr.A00708 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14033245-14034244 Eucalyptus grandis
Eucgr.A00708 2.0kb upstream 2.0kb upstream 7480 true Chr01: 14034245-14041724 Eucalyptus grandis
Eucgr.A00708 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14039725-14041724 Eucalyptus grandis
Eucgr.A00708 2.0kb downstream 2.0kb downstream 7480 true Chr01: 14032245-14039724 Eucalyptus grandis
Eucgr.A00708 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14032245-14034244 Eucalyptus grandis
Eucgr.A00708 5.0kb upstream 5.0kb upstream 10480 true Chr01: 14034245-14044724 Eucalyptus grandis
Eucgr.A00708 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14039725-14044724 Eucalyptus grandis
Eucgr.A00708 5.0kb downstream 5.0kb downstream 10480 true Chr01: 14029245-14039724 Eucalyptus grandis
Eucgr.A00708 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14029245-14034244 Eucalyptus grandis
Eucgr.A00708 10.0kb upstream 10.0kb upstream 15480 true Chr01: 14034245-14049724 Eucalyptus grandis
Eucgr.A00708 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14039725-14049724 Eucalyptus grandis
Eucgr.A00708 10.0kb downstream 10.0kb downstream 15480 true Chr01: 14024245-14039724 Eucalyptus grandis
Eucgr.A00708 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14024245-14034244 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.01634 0.0 12.114    
cufflinks 3.59154 0.0 8.94283   Low
cufflinks 4.10734 0.0 10.0916    
cufflinks 5.20659 0.0 12.4668    
cufflinks 10.8056 0.0 24.4888   High
cufflinks 5.59572 0.0 13.4076    

0 Strain