Gene : Eucgr.A00654 E. grandis v2.0
Defline:  (1 of 1) PTHR32444:SF6 - D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  734
Name:  ? Eucgr.A00654 Secondary Identifier:  ? PAC:32049221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00654 0.5kb upstream 0.5kb upstream 2659 true Chr01: 15275240-15277898 Eucalyptus grandis
Eucgr.A00654 0.5kb upstream 0.5kb upstream 500 false Chr01: 15277399-15277898 Eucalyptus grandis
Eucgr.A00654 0.5kb downstream 0.5kb downstream 2659 true Chr01: 15274740-15277398 Eucalyptus grandis
Eucgr.A00654 0.5kb downstream 0.5kb downstream 500 false Chr01: 15274740-15275239 Eucalyptus grandis
Eucgr.A00654 1.0kb upstream 1.0kb upstream 3159 true Chr01: 15275240-15278398 Eucalyptus grandis
Eucgr.A00654 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15277399-15278398 Eucalyptus grandis
Eucgr.A00654 1.0kb downstream 1.0kb downstream 3159 true Chr01: 15274240-15277398 Eucalyptus grandis
Eucgr.A00654 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15274240-15275239 Eucalyptus grandis
Eucgr.A00654 2.0kb upstream 2.0kb upstream 4159 true Chr01: 15275240-15279398 Eucalyptus grandis
Eucgr.A00654 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15277399-15279398 Eucalyptus grandis
Eucgr.A00654 2.0kb downstream 2.0kb downstream 4159 true Chr01: 15273240-15277398 Eucalyptus grandis
Eucgr.A00654 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15273240-15275239 Eucalyptus grandis
Eucgr.A00654 5.0kb upstream 5.0kb upstream 7159 true Chr01: 15275240-15282398 Eucalyptus grandis
Eucgr.A00654 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15277399-15282398 Eucalyptus grandis
Eucgr.A00654 5.0kb downstream 5.0kb downstream 7159 true Chr01: 15270240-15277398 Eucalyptus grandis
Eucgr.A00654 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15270240-15275239 Eucalyptus grandis
Eucgr.A00654 10.0kb upstream 10.0kb upstream 12159 true Chr01: 15275240-15287398 Eucalyptus grandis
Eucgr.A00654 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15277399-15287398 Eucalyptus grandis
Eucgr.A00654 10.0kb downstream 10.0kb downstream 12159 true Chr01: 15265240-15277398 Eucalyptus grandis
Eucgr.A00654 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15265240-15275239 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029223 5273 Angiosperm View MSA
124061052 5270 Rosid View MSA
123746754 5271 Pentapetalae View MSA
122790978 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.912842 0.0 2.98569    
cufflinks 97.0522 0.0 258.176 High High
cufflinks 1.06016 0.0 3.41436    
cufflinks 105.705 0.0 284.138 High High
cufflinks 21.932 0.0 49.6886    
cufflinks 1.11149 0.0 3.66444    

0 Strain