Gene : Eucgr.A00642 E. grandis v2.0
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  746
Name:  ? Eucgr.A00642 Secondary Identifier:  ? PAC:32047510
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6121 Eucalyptus grandis pathologic  
Egrandis PWY-6613 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00642 0.5kb upstream 0.5kb upstream 6051 true Chr01: 15428967-15435017 Eucalyptus grandis
Eucgr.A00642 0.5kb upstream 0.5kb upstream 500 false Chr01: 15428967-15429466 Eucalyptus grandis
Eucgr.A00642 0.5kb downstream 0.5kb downstream 6051 true Chr01: 15429467-15435517 Eucalyptus grandis
Eucgr.A00642 0.5kb downstream 0.5kb downstream 500 false Chr01: 15435018-15435517 Eucalyptus grandis
Eucgr.A00642 1.0kb upstream 1.0kb upstream 6551 true Chr01: 15428467-15435017 Eucalyptus grandis
Eucgr.A00642 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15428467-15429466 Eucalyptus grandis
Eucgr.A00642 1.0kb downstream 1.0kb downstream 6551 true Chr01: 15429467-15436017 Eucalyptus grandis
Eucgr.A00642 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15435018-15436017 Eucalyptus grandis
Eucgr.A00642 2.0kb upstream 2.0kb upstream 7551 true Chr01: 15427467-15435017 Eucalyptus grandis
Eucgr.A00642 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15427467-15429466 Eucalyptus grandis
Eucgr.A00642 2.0kb downstream 2.0kb downstream 7551 true Chr01: 15429467-15437017 Eucalyptus grandis
Eucgr.A00642 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15435018-15437017 Eucalyptus grandis
Eucgr.A00642 5.0kb upstream 5.0kb upstream 10551 true Chr01: 15424467-15435017 Eucalyptus grandis
Eucgr.A00642 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15424467-15429466 Eucalyptus grandis
Eucgr.A00642 5.0kb downstream 5.0kb downstream 10551 true Chr01: 15429467-15440017 Eucalyptus grandis
Eucgr.A00642 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15435018-15440017 Eucalyptus grandis
Eucgr.A00642 10.0kb upstream 10.0kb upstream 15551 true Chr01: 15419467-15435017 Eucalyptus grandis
Eucgr.A00642 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15419467-15429466 Eucalyptus grandis
Eucgr.A00642 10.0kb downstream 10.0kb downstream 15551 true Chr01: 15429467-15445017 Eucalyptus grandis
Eucgr.A00642 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15435018-15445017 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065104 5270 Rosid View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.48344 0.0 17.537    
cufflinks 3.35324 0.0 8.34968   Low
cufflinks 7.64649 0.0 17.8258    
cufflinks 5.74341 0.0 13.6681    
cufflinks 9.75137 0.0 28.312    
cufflinks 9.10014 0.0 21.0359    

0 Strain