Gene : Eucgr.A00606 E. grandis v2.0
Defline:  (1 of 1) PTHR13234//PTHR13234:SF20 - GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT Genomic Order:  779
Name:  ? Eucgr.A00606 Secondary Identifier:  ? PAC:32048697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00606 0.5kb upstream 0.5kb upstream 4557 true Chr01: 15953404-15957960 Eucalyptus grandis
Eucgr.A00606 0.5kb upstream 0.5kb upstream 500 false Chr01: 15953404-15953903 Eucalyptus grandis
Eucgr.A00606 0.5kb downstream 0.5kb downstream 4557 true Chr01: 15953904-15958460 Eucalyptus grandis
Eucgr.A00606 0.5kb downstream 0.5kb downstream 500 false Chr01: 15957961-15958460 Eucalyptus grandis
Eucgr.A00606 1.0kb upstream 1.0kb upstream 5057 true Chr01: 15952904-15957960 Eucalyptus grandis
Eucgr.A00606 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15952904-15953903 Eucalyptus grandis
Eucgr.A00606 1.0kb downstream 1.0kb downstream 5057 true Chr01: 15953904-15958960 Eucalyptus grandis
Eucgr.A00606 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15957961-15958960 Eucalyptus grandis
Eucgr.A00606 2.0kb upstream 2.0kb upstream 6057 true Chr01: 15951904-15957960 Eucalyptus grandis
Eucgr.A00606 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15951904-15953903 Eucalyptus grandis
Eucgr.A00606 2.0kb downstream 2.0kb downstream 6057 true Chr01: 15953904-15959960 Eucalyptus grandis
Eucgr.A00606 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15957961-15959960 Eucalyptus grandis
Eucgr.A00606 5.0kb upstream 5.0kb upstream 9057 true Chr01: 15948904-15957960 Eucalyptus grandis
Eucgr.A00606 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15948904-15953903 Eucalyptus grandis
Eucgr.A00606 5.0kb downstream 5.0kb downstream 9057 true Chr01: 15953904-15962960 Eucalyptus grandis
Eucgr.A00606 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15957961-15962960 Eucalyptus grandis
Eucgr.A00606 10.0kb upstream 10.0kb upstream 14057 true Chr01: 15943904-15957960 Eucalyptus grandis
Eucgr.A00606 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15943904-15953903 Eucalyptus grandis
Eucgr.A00606 10.0kb downstream 10.0kb downstream 14057 true Chr01: 15953904-15967960 Eucalyptus grandis
Eucgr.A00606 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15957961-15967960 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069226 5270 Rosid View MSA
123753662 5271 Pentapetalae View MSA
122787690 5272 Eudicot View MSA
122043804 5273 Angiosperm View MSA
121344699 5274 Embryophyte View MSA
123427496 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.5573 0.0 59.7988    
cufflinks 3.70615 0.0 9.96841   Low
cufflinks 13.5641 0.0 32.1816    
cufflinks 4.71185 0.0 12.4169   Low
cufflinks 31.8336 0.0 71.1827   High
cufflinks 12.2305 0.0 29.1204    

0 Strain