Gene : Eucgr.A00529 E. grandis v2.0
Defline:  (1 of 1) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  838
Name:  ? Eucgr.A00529 Secondary Identifier:  ? PAC:32048780
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5136 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-6837 Eucalyptus grandis pathologic  
Egrandis PWY-735 Eucalyptus grandis pathologic  
Egrandis PWY-7606 Eucalyptus grandis pathologic  
Egrandis PWY-7726 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00529 0.5kb upstream 0.5kb upstream 6234 true Chr01: 17006738-17012971 Eucalyptus grandis
Eucgr.A00529 0.5kb upstream 0.5kb upstream 500 false Chr01: 17012472-17012971 Eucalyptus grandis
Eucgr.A00529 0.5kb downstream 0.5kb downstream 6234 true Chr01: 17006238-17012471 Eucalyptus grandis
Eucgr.A00529 0.5kb downstream 0.5kb downstream 500 false Chr01: 17006238-17006737 Eucalyptus grandis
Eucgr.A00529 1.0kb upstream 1.0kb upstream 6734 true Chr01: 17006738-17013471 Eucalyptus grandis
Eucgr.A00529 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17012472-17013471 Eucalyptus grandis
Eucgr.A00529 1.0kb downstream 1.0kb downstream 6734 true Chr01: 17005738-17012471 Eucalyptus grandis
Eucgr.A00529 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17005738-17006737 Eucalyptus grandis
Eucgr.A00529 2.0kb upstream 2.0kb upstream 7734 true Chr01: 17006738-17014471 Eucalyptus grandis
Eucgr.A00529 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17012472-17014471 Eucalyptus grandis
Eucgr.A00529 2.0kb downstream 2.0kb downstream 7734 true Chr01: 17004738-17012471 Eucalyptus grandis
Eucgr.A00529 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17004738-17006737 Eucalyptus grandis
Eucgr.A00529 5.0kb upstream 5.0kb upstream 10734 true Chr01: 17006738-17017471 Eucalyptus grandis
Eucgr.A00529 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17012472-17017471 Eucalyptus grandis
Eucgr.A00529 5.0kb downstream 5.0kb downstream 10734 true Chr01: 17001738-17012471 Eucalyptus grandis
Eucgr.A00529 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17001738-17006737 Eucalyptus grandis
Eucgr.A00529 10.0kb upstream 10.0kb upstream 15734 true Chr01: 17006738-17022471 Eucalyptus grandis
Eucgr.A00529 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17012472-17022471 Eucalyptus grandis
Eucgr.A00529 10.0kb downstream 10.0kb downstream 15734 true Chr01: 16996738-17012471 Eucalyptus grandis
Eucgr.A00529 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16996738-17006737 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7071 0.0 46.3729   Low
cufflinks 25.7088 0.0 57.6911    
cufflinks 22.7614 0.0 59.0618    
cufflinks 30.6208 0.0 76.1217    
cufflinks 23.1248 0.0 52.0477    
cufflinks 39.1915 0.0 89.6241 High High

0 Strain