Gene : Eucgr.A00516 E. grandis v2.0
Defline:  (1 of 1) PTHR12526//PTHR12526:SF340 - GLYCOSYLTRANSFERASE Genomic Order:  850
Name:  ? Eucgr.A00516 Secondary Identifier:  ? PAC:32048428
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00516 0.5kb upstream 0.5kb upstream 4585 true Chr01: 17476923-17481507 Eucalyptus grandis
Eucgr.A00516 0.5kb upstream 0.5kb upstream 500 false Chr01: 17481008-17481507 Eucalyptus grandis
Eucgr.A00516 0.5kb downstream 0.5kb downstream 4585 true Chr01: 17476423-17481007 Eucalyptus grandis
Eucgr.A00516 0.5kb downstream 0.5kb downstream 500 false Chr01: 17476423-17476922 Eucalyptus grandis
Eucgr.A00516 1.0kb upstream 1.0kb upstream 5085 true Chr01: 17476923-17482007 Eucalyptus grandis
Eucgr.A00516 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17481008-17482007 Eucalyptus grandis
Eucgr.A00516 1.0kb downstream 1.0kb downstream 5085 true Chr01: 17475923-17481007 Eucalyptus grandis
Eucgr.A00516 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17475923-17476922 Eucalyptus grandis
Eucgr.A00516 2.0kb upstream 2.0kb upstream 6085 true Chr01: 17476923-17483007 Eucalyptus grandis
Eucgr.A00516 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17481008-17483007 Eucalyptus grandis
Eucgr.A00516 2.0kb downstream 2.0kb downstream 6085 true Chr01: 17474923-17481007 Eucalyptus grandis
Eucgr.A00516 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17474923-17476922 Eucalyptus grandis
Eucgr.A00516 5.0kb upstream 5.0kb upstream 9085 true Chr01: 17476923-17486007 Eucalyptus grandis
Eucgr.A00516 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17481008-17486007 Eucalyptus grandis
Eucgr.A00516 5.0kb downstream 5.0kb downstream 9085 true Chr01: 17471923-17481007 Eucalyptus grandis
Eucgr.A00516 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17471923-17476922 Eucalyptus grandis
Eucgr.A00516 10.0kb upstream 10.0kb upstream 14085 true Chr01: 17476923-17491007 Eucalyptus grandis
Eucgr.A00516 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17481008-17491007 Eucalyptus grandis
Eucgr.A00516 10.0kb downstream 10.0kb downstream 14085 true Chr01: 17466923-17481007 Eucalyptus grandis
Eucgr.A00516 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17466923-17476922 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066463 5270 Rosid View MSA
123749252 5271 Pentapetalae View MSA
122792766 5272 Eudicot View MSA
122049037 5273 Angiosperm View MSA
123429006 5275 Viridiplantae View MSA
121344163 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 107.785 0.0 250.408 High High
cufflinks 17.1364 0.0 38.2705   Low
cufflinks 47.9883 0.0 106.806 High  
cufflinks 32.2378 0.0 71.3171    
cufflinks 36.8006 0.0 81.5154    
cufflinks 106.537 0.0 246.847 High High

0 Strain