Gene : Eucgr.A00507 E. grandis v2.0
Defline:  (1 of 1) PTHR12383//PTHR12383:SF22 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Genomic Order:  859
Name:  ? Eucgr.A00507 Secondary Identifier:  ? PAC:32048548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00507 0.5kb upstream 0.5kb upstream 5385 true Chr01: 17654258-17659642 Eucalyptus grandis
Eucgr.A00507 0.5kb upstream 0.5kb upstream 500 false Chr01: 17659143-17659642 Eucalyptus grandis
Eucgr.A00507 0.5kb downstream 0.5kb downstream 5385 true Chr01: 17653758-17659142 Eucalyptus grandis
Eucgr.A00507 0.5kb downstream 0.5kb downstream 500 false Chr01: 17653758-17654257 Eucalyptus grandis
Eucgr.A00507 1.0kb upstream 1.0kb upstream 5885 true Chr01: 17654258-17660142 Eucalyptus grandis
Eucgr.A00507 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17659143-17660142 Eucalyptus grandis
Eucgr.A00507 1.0kb downstream 1.0kb downstream 5885 true Chr01: 17653258-17659142 Eucalyptus grandis
Eucgr.A00507 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17653258-17654257 Eucalyptus grandis
Eucgr.A00507 2.0kb upstream 2.0kb upstream 6885 true Chr01: 17654258-17661142 Eucalyptus grandis
Eucgr.A00507 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17659143-17661142 Eucalyptus grandis
Eucgr.A00507 2.0kb downstream 2.0kb downstream 6885 true Chr01: 17652258-17659142 Eucalyptus grandis
Eucgr.A00507 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17652258-17654257 Eucalyptus grandis
Eucgr.A00507 5.0kb upstream 5.0kb upstream 9885 true Chr01: 17654258-17664142 Eucalyptus grandis
Eucgr.A00507 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17659143-17664142 Eucalyptus grandis
Eucgr.A00507 5.0kb downstream 5.0kb downstream 9885 true Chr01: 17649258-17659142 Eucalyptus grandis
Eucgr.A00507 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17649258-17654257 Eucalyptus grandis
Eucgr.A00507 10.0kb upstream 10.0kb upstream 14885 true Chr01: 17654258-17669142 Eucalyptus grandis
Eucgr.A00507 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17659143-17669142 Eucalyptus grandis
Eucgr.A00507 10.0kb downstream 10.0kb downstream 14885 true Chr01: 17644258-17659142 Eucalyptus grandis
Eucgr.A00507 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17644258-17654257 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066686 5270 Rosid View MSA
123738438 5271 Pentapetalae View MSA
122786938 5272 Eudicot View MSA
122042561 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121346619 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.64702 0.0 12.7494    
cufflinks 3.40025 0.0 9.6007    
cufflinks 3.38631 0.0 11.9092    
cufflinks 1.45369 0.0 4.72556    
cufflinks 7.22167 0.0 23.5428   High
cufflinks 0.861409 0.0 3.34246   Low

0 Strain