Gene : Eucgr.A00430 E. grandis v2.0
Defline:  (1 of 1) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  252
Name:  ? Eucgr.A00430 Secondary Identifier:  ? PAC:32045915
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6730 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00430 0.5kb upstream 0.5kb upstream 6130 true Chr01: 5556379-5562508 Eucalyptus grandis
Eucgr.A00430 0.5kb upstream 0.5kb upstream 500 false Chr01: 5562009-5562508 Eucalyptus grandis
Eucgr.A00430 0.5kb downstream 0.5kb downstream 6130 true Chr01: 5555879-5562008 Eucalyptus grandis
Eucgr.A00430 0.5kb downstream 0.5kb downstream 500 false Chr01: 5555879-5556378 Eucalyptus grandis
Eucgr.A00430 1.0kb upstream 1.0kb upstream 6630 true Chr01: 5556379-5563008 Eucalyptus grandis
Eucgr.A00430 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5562009-5563008 Eucalyptus grandis
Eucgr.A00430 1.0kb downstream 1.0kb downstream 6630 true Chr01: 5555379-5562008 Eucalyptus grandis
Eucgr.A00430 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5555379-5556378 Eucalyptus grandis
Eucgr.A00430 2.0kb upstream 2.0kb upstream 7630 true Chr01: 5556379-5564008 Eucalyptus grandis
Eucgr.A00430 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5562009-5564008 Eucalyptus grandis
Eucgr.A00430 2.0kb downstream 2.0kb downstream 7630 true Chr01: 5554379-5562008 Eucalyptus grandis
Eucgr.A00430 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5554379-5556378 Eucalyptus grandis
Eucgr.A00430 5.0kb upstream 5.0kb upstream 10630 true Chr01: 5556379-5567008 Eucalyptus grandis
Eucgr.A00430 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5562009-5567008 Eucalyptus grandis
Eucgr.A00430 5.0kb downstream 5.0kb downstream 10630 true Chr01: 5551379-5562008 Eucalyptus grandis
Eucgr.A00430 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5551379-5556378 Eucalyptus grandis
Eucgr.A00430 10.0kb upstream 10.0kb upstream 15630 true Chr01: 5556379-5572008 Eucalyptus grandis
Eucgr.A00430 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5562009-5572008 Eucalyptus grandis
Eucgr.A00430 10.0kb downstream 10.0kb downstream 15630 true Chr01: 5546379-5562008 Eucalyptus grandis
Eucgr.A00430 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5546379-5556378 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30429 0.0 6.91005    
cufflinks 5.08176 0.0 18.4633    
cufflinks 4.46519 0.0 12.1504    
cufflinks 1.27447 0.0 4.19374   Low
cufflinks 2.95891 0.0 8.46237    
cufflinks 9.62809 0.0 23.6171   High

0 Strain