Gene : Eucgr.A00348 E. grandis v2.0
Defline:  (1 of 1) PTHR22912:SF165 - DIHYDROLIPOYL DEHYDROGENASE 1, CHLOROPLASTIC-RELATED Genomic Order:  317
Name:  ? Eucgr.A00348 Secondary Identifier:  ? PAC:32046134
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCLEAV-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5046 Eucalyptus grandis pathologic  
Egrandis PWY-5084 Eucalyptus grandis pathologic  
Egrandis PWY-5173 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PYRUVDEHYD-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00348 0.5kb upstream 0.5kb upstream 9118 true Chr01: 6927331-6936448 Eucalyptus grandis
Eucgr.A00348 0.5kb upstream 0.5kb upstream 500 false Chr01: 6927331-6927830 Eucalyptus grandis
Eucgr.A00348 0.5kb downstream 0.5kb downstream 9118 true Chr01: 6927831-6936948 Eucalyptus grandis
Eucgr.A00348 0.5kb downstream 0.5kb downstream 500 false Chr01: 6936449-6936948 Eucalyptus grandis
Eucgr.A00348 1.0kb upstream 1.0kb upstream 9618 true Chr01: 6926831-6936448 Eucalyptus grandis
Eucgr.A00348 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6926831-6927830 Eucalyptus grandis
Eucgr.A00348 1.0kb downstream 1.0kb downstream 9618 true Chr01: 6927831-6937448 Eucalyptus grandis
Eucgr.A00348 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6936449-6937448 Eucalyptus grandis
Eucgr.A00348 2.0kb upstream 2.0kb upstream 10618 true Chr01: 6925831-6936448 Eucalyptus grandis
Eucgr.A00348 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6925831-6927830 Eucalyptus grandis
Eucgr.A00348 2.0kb downstream 2.0kb downstream 10618 true Chr01: 6927831-6938448 Eucalyptus grandis
Eucgr.A00348 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6936449-6938448 Eucalyptus grandis
Eucgr.A00348 5.0kb upstream 5.0kb upstream 13618 true Chr01: 6922831-6936448 Eucalyptus grandis
Eucgr.A00348 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6922831-6927830 Eucalyptus grandis
Eucgr.A00348 5.0kb downstream 5.0kb downstream 13618 true Chr01: 6927831-6941448 Eucalyptus grandis
Eucgr.A00348 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6936449-6941448 Eucalyptus grandis
Eucgr.A00348 10.0kb upstream 10.0kb upstream 18618 true Chr01: 6917831-6936448 Eucalyptus grandis
Eucgr.A00348 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6917831-6927830 Eucalyptus grandis
Eucgr.A00348 10.0kb downstream 10.0kb downstream 18618 true Chr01: 6927831-6946448 Eucalyptus grandis
Eucgr.A00348 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6936449-6946448 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
124065612 5270 Rosid View MSA
123745310 5271 Pentapetalae View MSA
122789628 5272 Eudicot View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9063 0.0 33.034    
cufflinks 4.79411 0.0 11.2568   Low
cufflinks 12.8342 0.0 28.5079    
cufflinks 4.96151 0.0 11.5879   Low
cufflinks 7.23446 0.0 16.4878    
cufflinks 20.9285 0.0 46.2844   High

0 Strain