Gene : Eucgr.A00373 E. grandis v2.0
Defline:  (1 of 41) PF00582 - Universal stress protein family (Usp) Genomic Order:  299
Name:  ? Eucgr.A00373 Secondary Identifier:  ? PAC:32045917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00373 0.5kb upstream 0.5kb upstream 2780 true Chr01: 6582659-6585438 Eucalyptus grandis
Eucgr.A00373 0.5kb upstream 0.5kb upstream 500 false Chr01: 6582659-6583158 Eucalyptus grandis
Eucgr.A00373 0.5kb downstream 0.5kb downstream 2780 true Chr01: 6583159-6585938 Eucalyptus grandis
Eucgr.A00373 0.5kb downstream 0.5kb downstream 500 false Chr01: 6585439-6585938 Eucalyptus grandis
Eucgr.A00373 1.0kb upstream 1.0kb upstream 3280 true Chr01: 6582159-6585438 Eucalyptus grandis
Eucgr.A00373 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6582159-6583158 Eucalyptus grandis
Eucgr.A00373 1.0kb downstream 1.0kb downstream 3280 true Chr01: 6583159-6586438 Eucalyptus grandis
Eucgr.A00373 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6585439-6586438 Eucalyptus grandis
Eucgr.A00373 2.0kb upstream 2.0kb upstream 4280 true Chr01: 6581159-6585438 Eucalyptus grandis
Eucgr.A00373 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6581159-6583158 Eucalyptus grandis
Eucgr.A00373 2.0kb downstream 2.0kb downstream 4280 true Chr01: 6583159-6587438 Eucalyptus grandis
Eucgr.A00373 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6585439-6587438 Eucalyptus grandis
Eucgr.A00373 5.0kb upstream 5.0kb upstream 7280 true Chr01: 6578159-6585438 Eucalyptus grandis
Eucgr.A00373 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6578159-6583158 Eucalyptus grandis
Eucgr.A00373 5.0kb downstream 5.0kb downstream 7280 true Chr01: 6583159-6590438 Eucalyptus grandis
Eucgr.A00373 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6585439-6590438 Eucalyptus grandis
Eucgr.A00373 10.0kb upstream 10.0kb upstream 12280 true Chr01: 6573159-6585438 Eucalyptus grandis
Eucgr.A00373 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6573159-6583158 Eucalyptus grandis
Eucgr.A00373 10.0kb downstream 10.0kb downstream 12280 true Chr01: 6583159-6595438 Eucalyptus grandis
Eucgr.A00373 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6585439-6595438 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063992 5270 Rosid View MSA
123739309 5271 Pentapetalae View MSA
122785643 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.941 0.0 192.322 High  
cufflinks 137.485 0.0 315.299 High  
cufflinks 66.516 0.0 147.649 High  
cufflinks 223.297 0.0 533.072 High High
cufflinks 177.132 0.0 414.169 High  
cufflinks 48.7329 0.0 107.779 High Low

0 Strain