Gene : Eucgr.A00374 E. grandis v2.0
Defline:  (1 of 189) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  298
Name:  ? Eucgr.A00374 Secondary Identifier:  ? PAC:32046827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00374 0.5kb upstream 0.5kb upstream 2608 true Chr01: 6577103-6579710 Eucalyptus grandis
Eucgr.A00374 0.5kb upstream 0.5kb upstream 500 false Chr01: 6577103-6577602 Eucalyptus grandis
Eucgr.A00374 0.5kb downstream 0.5kb downstream 2608 true Chr01: 6577603-6580210 Eucalyptus grandis
Eucgr.A00374 0.5kb downstream 0.5kb downstream 500 false Chr01: 6579711-6580210 Eucalyptus grandis
Eucgr.A00374 1.0kb upstream 1.0kb upstream 3108 true Chr01: 6576603-6579710 Eucalyptus grandis
Eucgr.A00374 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6576603-6577602 Eucalyptus grandis
Eucgr.A00374 1.0kb downstream 1.0kb downstream 3108 true Chr01: 6577603-6580710 Eucalyptus grandis
Eucgr.A00374 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6579711-6580710 Eucalyptus grandis
Eucgr.A00374 2.0kb upstream 2.0kb upstream 4108 true Chr01: 6575603-6579710 Eucalyptus grandis
Eucgr.A00374 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6575603-6577602 Eucalyptus grandis
Eucgr.A00374 2.0kb downstream 2.0kb downstream 4108 true Chr01: 6577603-6581710 Eucalyptus grandis
Eucgr.A00374 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6579711-6581710 Eucalyptus grandis
Eucgr.A00374 5.0kb upstream 5.0kb upstream 7108 true Chr01: 6572603-6579710 Eucalyptus grandis
Eucgr.A00374 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6572603-6577602 Eucalyptus grandis
Eucgr.A00374 5.0kb downstream 5.0kb downstream 7108 true Chr01: 6577603-6584710 Eucalyptus grandis
Eucgr.A00374 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6579711-6584710 Eucalyptus grandis
Eucgr.A00374 10.0kb upstream 10.0kb upstream 12108 true Chr01: 6567603-6579710 Eucalyptus grandis
Eucgr.A00374 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6567603-6577602 Eucalyptus grandis
Eucgr.A00374 10.0kb downstream 10.0kb downstream 12108 true Chr01: 6577603-6589710 Eucalyptus grandis
Eucgr.A00374 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6579711-6589710 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070263 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.320021 0.0 1.0903 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.159453 0.0 0.597715 Low Low
cufflinks 0.767431 0.0 2.34021    
cufflinks 1.67398 0.0 4.67602    
cufflinks 2.51462 0.0 6.75821   High

0 Strain