Gene : Eucgr.A00285 E. grandis v2.0
Defline:  (1 of 2) PTHR11073:SF6 - CALRETICULIN-3 Genomic Order:  110
Name:  ? Eucgr.A00285 Secondary Identifier:  ? PAC:32049027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00285 0.5kb upstream 0.5kb upstream 8438 true Chr01: 2045683-2054120 Eucalyptus grandis
Eucgr.A00285 0.5kb upstream 0.5kb upstream 500 false Chr01: 2053621-2054120 Eucalyptus grandis
Eucgr.A00285 0.5kb downstream 0.5kb downstream 8438 true Chr01: 2045183-2053620 Eucalyptus grandis
Eucgr.A00285 0.5kb downstream 0.5kb downstream 500 false Chr01: 2045183-2045682 Eucalyptus grandis
Eucgr.A00285 1.0kb upstream 1.0kb upstream 8938 true Chr01: 2045683-2054620 Eucalyptus grandis
Eucgr.A00285 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2053621-2054620 Eucalyptus grandis
Eucgr.A00285 1.0kb downstream 1.0kb downstream 8938 true Chr01: 2044683-2053620 Eucalyptus grandis
Eucgr.A00285 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2044683-2045682 Eucalyptus grandis
Eucgr.A00285 2.0kb upstream 2.0kb upstream 9938 true Chr01: 2045683-2055620 Eucalyptus grandis
Eucgr.A00285 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2053621-2055620 Eucalyptus grandis
Eucgr.A00285 2.0kb downstream 2.0kb downstream 9938 true Chr01: 2043683-2053620 Eucalyptus grandis
Eucgr.A00285 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2043683-2045682 Eucalyptus grandis
Eucgr.A00285 5.0kb upstream 5.0kb upstream 12938 true Chr01: 2045683-2058620 Eucalyptus grandis
Eucgr.A00285 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2053621-2058620 Eucalyptus grandis
Eucgr.A00285 5.0kb downstream 5.0kb downstream 12938 true Chr01: 2040683-2053620 Eucalyptus grandis
Eucgr.A00285 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2040683-2045682 Eucalyptus grandis
Eucgr.A00285 10.0kb upstream 10.0kb upstream 17938 true Chr01: 2045683-2063620 Eucalyptus grandis
Eucgr.A00285 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2053621-2063620 Eucalyptus grandis
Eucgr.A00285 10.0kb downstream 10.0kb downstream 17938 true Chr01: 2035683-2053620 Eucalyptus grandis
Eucgr.A00285 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2035683-2045682 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.2427 0.0 177.775 High  
cufflinks 38.4114 0.0 99.8309    
cufflinks 97.8907 0.0 285.349 High High
cufflinks 60.9613 0.0 163.263 High  
cufflinks 31.5978 0.0 81.6447   Low
cufflinks 66.2422 0.0 151.631 High  

0 Strain