Gene : Eucgr.A00287 E. grandis v2.0
Defline:  (1 of 2) PTHR13077:SF6 - 15 KDA SELENOPROTEIN Genomic Order:  112
Name:  ? Eucgr.A00287 Secondary Identifier:  ? PAC:32047849
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00287 0.5kb upstream 0.5kb upstream 3637 true Chr01: 2077591-2081227 Eucalyptus grandis
Eucgr.A00287 0.5kb upstream 0.5kb upstream 500 false Chr01: 2080728-2081227 Eucalyptus grandis
Eucgr.A00287 0.5kb downstream 0.5kb downstream 3637 true Chr01: 2077091-2080727 Eucalyptus grandis
Eucgr.A00287 0.5kb downstream 0.5kb downstream 500 false Chr01: 2077091-2077590 Eucalyptus grandis
Eucgr.A00287 1.0kb upstream 1.0kb upstream 4137 true Chr01: 2077591-2081727 Eucalyptus grandis
Eucgr.A00287 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2080728-2081727 Eucalyptus grandis
Eucgr.A00287 1.0kb downstream 1.0kb downstream 4137 true Chr01: 2076591-2080727 Eucalyptus grandis
Eucgr.A00287 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2076591-2077590 Eucalyptus grandis
Eucgr.A00287 2.0kb upstream 2.0kb upstream 5137 true Chr01: 2077591-2082727 Eucalyptus grandis
Eucgr.A00287 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2080728-2082727 Eucalyptus grandis
Eucgr.A00287 2.0kb downstream 2.0kb downstream 5137 true Chr01: 2075591-2080727 Eucalyptus grandis
Eucgr.A00287 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2075591-2077590 Eucalyptus grandis
Eucgr.A00287 5.0kb upstream 5.0kb upstream 8137 true Chr01: 2077591-2085727 Eucalyptus grandis
Eucgr.A00287 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2080728-2085727 Eucalyptus grandis
Eucgr.A00287 5.0kb downstream 5.0kb downstream 8137 true Chr01: 2072591-2080727 Eucalyptus grandis
Eucgr.A00287 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2072591-2077590 Eucalyptus grandis
Eucgr.A00287 10.0kb upstream 10.0kb upstream 13137 true Chr01: 2077591-2090727 Eucalyptus grandis
Eucgr.A00287 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2080728-2090727 Eucalyptus grandis
Eucgr.A00287 10.0kb downstream 10.0kb downstream 13137 true Chr01: 2067591-2080727 Eucalyptus grandis
Eucgr.A00287 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2067591-2077590 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066908 5270 Rosid View MSA
123736516 5271 Pentapetalae View MSA
122788983 5272 Eudicot View MSA
122044015 5273 Angiosperm View MSA
121346057 5274 Embryophyte View MSA
123424520 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5295 0.0 57.6446   Low
cufflinks 33.9782 0.0 78.7973   High
cufflinks 26.0524 0.0 76.1457 High  
cufflinks 25.6744 0.0 76.1701    
cufflinks 31.4444 0.0 85.8101    
cufflinks 28.4456 0.0 65.6885    

0 Strain