Gene : Eucgr.A00305 E. grandis v2.0
Defline:  (1 of 5) PF08523 - Multiprotein bridging factor 1 (MBF1) Genomic Order:  212
Name:  ? Eucgr.A00305 Secondary Identifier:  ? PAC:32046891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00305 0.5kb upstream 0.5kb upstream 758 true Chr01: 4321912-4322669 Eucalyptus grandis
Eucgr.A00305 0.5kb upstream 0.5kb upstream 500 false Chr01: 4322170-4322669 Eucalyptus grandis
Eucgr.A00305 0.5kb downstream 0.5kb downstream 758 true Chr01: 4321412-4322169 Eucalyptus grandis
Eucgr.A00305 0.5kb downstream 0.5kb downstream 500 false Chr01: 4321412-4321911 Eucalyptus grandis
Eucgr.A00305 1.0kb upstream 1.0kb upstream 1258 true Chr01: 4321912-4323169 Eucalyptus grandis
Eucgr.A00305 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4322170-4323169 Eucalyptus grandis
Eucgr.A00305 1.0kb downstream 1.0kb downstream 1258 true Chr01: 4320912-4322169 Eucalyptus grandis
Eucgr.A00305 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4320912-4321911 Eucalyptus grandis
Eucgr.A00305 2.0kb upstream 2.0kb upstream 2258 true Chr01: 4321912-4324169 Eucalyptus grandis
Eucgr.A00305 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4322170-4324169 Eucalyptus grandis
Eucgr.A00305 2.0kb downstream 2.0kb downstream 2258 true Chr01: 4319912-4322169 Eucalyptus grandis
Eucgr.A00305 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4319912-4321911 Eucalyptus grandis
Eucgr.A00305 5.0kb upstream 5.0kb upstream 5258 true Chr01: 4321912-4327169 Eucalyptus grandis
Eucgr.A00305 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4322170-4327169 Eucalyptus grandis
Eucgr.A00305 5.0kb downstream 5.0kb downstream 5258 true Chr01: 4316912-4322169 Eucalyptus grandis
Eucgr.A00305 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4316912-4321911 Eucalyptus grandis
Eucgr.A00305 10.0kb upstream 10.0kb upstream 10258 true Chr01: 4321912-4332169 Eucalyptus grandis
Eucgr.A00305 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4322170-4332169 Eucalyptus grandis
Eucgr.A00305 10.0kb downstream 10.0kb downstream 10258 true Chr01: 4311912-4322169 Eucalyptus grandis
Eucgr.A00305 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4311912-4321911 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051333 5270 Rosid View MSA
123620117 5271 Pentapetalae View MSA
122654533 5272 Eudicot View MSA
122051075 5273 Angiosperm View MSA
121312281 5274 Embryophyte View MSA
123349468 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.9655 0.0 31.3155   High
cufflinks 0.561528 0.0 3.53264 Low  
cufflinks 0.879039 0.0 5.09725    
cufflinks 1.04247 0.0 5.62583    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain