Gene : Eucgr.A00262 E. grandis v2.0
Defline:  (1 of 4) PTHR24349:SF160 - CALCIUM-DEPENDENT PROTEIN KINASE 24 Genomic Order:  40
Name:  ? Eucgr.A00262 Secondary Identifier:  ? PAC:32046562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00262 0.5kb upstream 0.5kb upstream 3621 true Chr01: 827219-830839 Eucalyptus grandis
Eucgr.A00262 0.5kb upstream 0.5kb upstream 500 false Chr01: 830340-830839 Eucalyptus grandis
Eucgr.A00262 0.5kb downstream 0.5kb downstream 3621 true Chr01: 826719-830339 Eucalyptus grandis
Eucgr.A00262 0.5kb downstream 0.5kb downstream 500 false Chr01: 826719-827218 Eucalyptus grandis
Eucgr.A00262 1.0kb upstream 1.0kb upstream 4121 true Chr01: 827219-831339 Eucalyptus grandis
Eucgr.A00262 1.0kb upstream 1.0kb upstream 1000 false Chr01: 830340-831339 Eucalyptus grandis
Eucgr.A00262 1.0kb downstream 1.0kb downstream 4121 true Chr01: 826219-830339 Eucalyptus grandis
Eucgr.A00262 1.0kb downstream 1.0kb downstream 1000 false Chr01: 826219-827218 Eucalyptus grandis
Eucgr.A00262 2.0kb upstream 2.0kb upstream 5121 true Chr01: 827219-832339 Eucalyptus grandis
Eucgr.A00262 2.0kb upstream 2.0kb upstream 2000 false Chr01: 830340-832339 Eucalyptus grandis
Eucgr.A00262 2.0kb downstream 2.0kb downstream 5121 true Chr01: 825219-830339 Eucalyptus grandis
Eucgr.A00262 2.0kb downstream 2.0kb downstream 2000 false Chr01: 825219-827218 Eucalyptus grandis
Eucgr.A00262 5.0kb upstream 5.0kb upstream 8121 true Chr01: 827219-835339 Eucalyptus grandis
Eucgr.A00262 5.0kb upstream 5.0kb upstream 5000 false Chr01: 830340-835339 Eucalyptus grandis
Eucgr.A00262 5.0kb downstream 5.0kb downstream 8121 true Chr01: 822219-830339 Eucalyptus grandis
Eucgr.A00262 5.0kb downstream 5.0kb downstream 5000 false Chr01: 822219-827218 Eucalyptus grandis
Eucgr.A00262 10.0kb upstream 10.0kb upstream 13121 true Chr01: 827219-840339 Eucalyptus grandis
Eucgr.A00262 10.0kb upstream 10.0kb upstream 10000 false Chr01: 830340-840339 Eucalyptus grandis
Eucgr.A00262 10.0kb downstream 10.0kb downstream 13121 true Chr01: 817219-830339 Eucalyptus grandis
Eucgr.A00262 10.0kb downstream 10.0kb downstream 10000 false Chr01: 817219-827218 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779275 5273 Angiosperm View MSA
124066973 5270 Rosid View MSA
123741772 5271 Pentapetalae View MSA
122770123 5272 Eudicot View MSA
121050948 5274 Embryophyte View MSA
123091056 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.295725 0.0 0.975591 Low  
cufflinks 1.03492 0.0 2.93103   High
cufflinks 0.425155 0.0 1.33424    
cufflinks 0.168226 0.0 0.594872 Low Low
cufflinks 0.485881 0.0 1.50286 Low  
cufflinks 0.369935 0.0 1.18974 Low  

0 Strain