Gene : Eucgr.A00245 E. grandis v2.0
Defline:  (1 of 1) PTHR13020:SF36 - EXPRESSED PROTEIN Genomic Order:  24
Name:  ? Eucgr.A00245 Secondary Identifier:  ? PAC:32046090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00245 0.5kb upstream 0.5kb upstream 9316 true Chr01: 562406-571721 Eucalyptus grandis
Eucgr.A00245 0.5kb upstream 0.5kb upstream 500 false Chr01: 562406-562905 Eucalyptus grandis
Eucgr.A00245 0.5kb downstream 0.5kb downstream 9316 true Chr01: 562906-572221 Eucalyptus grandis
Eucgr.A00245 0.5kb downstream 0.5kb downstream 500 false Chr01: 571722-572221 Eucalyptus grandis
Eucgr.A00245 1.0kb upstream 1.0kb upstream 9816 true Chr01: 561906-571721 Eucalyptus grandis
Eucgr.A00245 1.0kb upstream 1.0kb upstream 1000 false Chr01: 561906-562905 Eucalyptus grandis
Eucgr.A00245 1.0kb downstream 1.0kb downstream 9816 true Chr01: 562906-572721 Eucalyptus grandis
Eucgr.A00245 1.0kb downstream 1.0kb downstream 1000 false Chr01: 571722-572721 Eucalyptus grandis
Eucgr.A00245 2.0kb upstream 2.0kb upstream 10816 true Chr01: 560906-571721 Eucalyptus grandis
Eucgr.A00245 2.0kb upstream 2.0kb upstream 2000 false Chr01: 560906-562905 Eucalyptus grandis
Eucgr.A00245 2.0kb downstream 2.0kb downstream 10816 true Chr01: 562906-573721 Eucalyptus grandis
Eucgr.A00245 2.0kb downstream 2.0kb downstream 2000 false Chr01: 571722-573721 Eucalyptus grandis
Eucgr.A00245 5.0kb upstream 5.0kb upstream 13816 true Chr01: 557906-571721 Eucalyptus grandis
Eucgr.A00245 5.0kb upstream 5.0kb upstream 5000 false Chr01: 557906-562905 Eucalyptus grandis
Eucgr.A00245 5.0kb downstream 5.0kb downstream 13816 true Chr01: 562906-576721 Eucalyptus grandis
Eucgr.A00245 5.0kb downstream 5.0kb downstream 5000 false Chr01: 571722-576721 Eucalyptus grandis
Eucgr.A00245 10.0kb upstream 10.0kb upstream 18816 true Chr01: 552906-571721 Eucalyptus grandis
Eucgr.A00245 10.0kb upstream 10.0kb upstream 10000 false Chr01: 552906-562905 Eucalyptus grandis
Eucgr.A00245 10.0kb downstream 10.0kb downstream 18816 true Chr01: 562906-581721 Eucalyptus grandis
Eucgr.A00245 10.0kb downstream 10.0kb downstream 10000 false Chr01: 571722-581721 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068020 5270 Rosid View MSA
123746663 5271 Pentapetalae View MSA
122772002 5272 Eudicot View MSA
122046799 5273 Angiosperm View MSA
121344006 5274 Embryophyte View MSA
123425372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.15989 0.0 18.7881   Low
cufflinks 8.96039 0.0 20.3685    
cufflinks 8.62378 0.0 19.7234    
cufflinks 11.2265 0.0 25.2338    
cufflinks 12.2305 0.0 27.4203    
cufflinks 14.5687 0.0 32.5713   High

0 Strain