Gene : Eucgr.A01236 E. grandis v2.0
Defline:  (1 of 2) PTHR24073:SF516 - RAS-RELATED PROTEIN RABE1C Genomic Order:  1026
Name:  ? Eucgr.A01236 Secondary Identifier:  ? PAC:32048481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01236 0.5kb upstream 0.5kb upstream 4626 true Chr01: 23061297-23065922 Eucalyptus grandis
Eucgr.A01236 0.5kb upstream 0.5kb upstream 500 false Chr01: 23061297-23061796 Eucalyptus grandis
Eucgr.A01236 0.5kb downstream 0.5kb downstream 4626 true Chr01: 23061797-23066422 Eucalyptus grandis
Eucgr.A01236 0.5kb downstream 0.5kb downstream 500 false Chr01: 23065923-23066422 Eucalyptus grandis
Eucgr.A01236 1.0kb upstream 1.0kb upstream 5126 true Chr01: 23060797-23065922 Eucalyptus grandis
Eucgr.A01236 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23060797-23061796 Eucalyptus grandis
Eucgr.A01236 1.0kb downstream 1.0kb downstream 5126 true Chr01: 23061797-23066922 Eucalyptus grandis
Eucgr.A01236 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23065923-23066922 Eucalyptus grandis
Eucgr.A01236 2.0kb upstream 2.0kb upstream 6126 true Chr01: 23059797-23065922 Eucalyptus grandis
Eucgr.A01236 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23059797-23061796 Eucalyptus grandis
Eucgr.A01236 2.0kb downstream 2.0kb downstream 6126 true Chr01: 23061797-23067922 Eucalyptus grandis
Eucgr.A01236 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23065923-23067922 Eucalyptus grandis
Eucgr.A01236 5.0kb upstream 5.0kb upstream 9126 true Chr01: 23056797-23065922 Eucalyptus grandis
Eucgr.A01236 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23056797-23061796 Eucalyptus grandis
Eucgr.A01236 5.0kb downstream 5.0kb downstream 9126 true Chr01: 23061797-23070922 Eucalyptus grandis
Eucgr.A01236 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23065923-23070922 Eucalyptus grandis
Eucgr.A01236 10.0kb upstream 10.0kb upstream 14126 true Chr01: 23051797-23065922 Eucalyptus grandis
Eucgr.A01236 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23051797-23061796 Eucalyptus grandis
Eucgr.A01236 10.0kb downstream 10.0kb downstream 14126 true Chr01: 23061797-23075922 Eucalyptus grandis
Eucgr.A01236 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23065923-23075922 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052217 5270 Rosid View MSA
123750125 5271 Pentapetalae View MSA
122789123 5272 Eudicot View MSA
122050642 5273 Angiosperm View MSA
123429129 5275 Viridiplantae View MSA
121344035 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.757 0.0 86.5202 High  
cufflinks 62.0883 0.0 141.913 High  
cufflinks 23.5277 0.0 54.7627   Low
cufflinks 72.721 0.0 167.449 High High
cufflinks 40.927 0.0 92.4249 High  
cufflinks 34.4839 0.0 77.7074 High  

0 Strain