Gene : Eucgr.A01244 E. grandis v2.0
Defline:  (1 of 2) PTHR24098:SF12 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  1020
Name:  ? Eucgr.A01244 Secondary Identifier:  ? PAC:32046893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01244 0.5kb upstream 0.5kb upstream 13839 true Chr01: 22916122-22929960 Eucalyptus grandis
Eucgr.A01244 0.5kb upstream 0.5kb upstream 500 false Chr01: 22916122-22916621 Eucalyptus grandis
Eucgr.A01244 0.5kb downstream 0.5kb downstream 13839 true Chr01: 22916622-22930460 Eucalyptus grandis
Eucgr.A01244 0.5kb downstream 0.5kb downstream 500 false Chr01: 22929961-22930460 Eucalyptus grandis
Eucgr.A01244 1.0kb upstream 1.0kb upstream 14339 true Chr01: 22915622-22929960 Eucalyptus grandis
Eucgr.A01244 1.0kb upstream 1.0kb upstream 1000 false Chr01: 22915622-22916621 Eucalyptus grandis
Eucgr.A01244 1.0kb downstream 1.0kb downstream 14339 true Chr01: 22916622-22930960 Eucalyptus grandis
Eucgr.A01244 1.0kb downstream 1.0kb downstream 1000 false Chr01: 22929961-22930960 Eucalyptus grandis
Eucgr.A01244 2.0kb upstream 2.0kb upstream 15339 true Chr01: 22914622-22929960 Eucalyptus grandis
Eucgr.A01244 2.0kb upstream 2.0kb upstream 2000 false Chr01: 22914622-22916621 Eucalyptus grandis
Eucgr.A01244 2.0kb downstream 2.0kb downstream 15339 true Chr01: 22916622-22931960 Eucalyptus grandis
Eucgr.A01244 2.0kb downstream 2.0kb downstream 2000 false Chr01: 22929961-22931960 Eucalyptus grandis
Eucgr.A01244 5.0kb upstream 5.0kb upstream 18339 true Chr01: 22911622-22929960 Eucalyptus grandis
Eucgr.A01244 5.0kb upstream 5.0kb upstream 5000 false Chr01: 22911622-22916621 Eucalyptus grandis
Eucgr.A01244 5.0kb downstream 5.0kb downstream 18339 true Chr01: 22916622-22934960 Eucalyptus grandis
Eucgr.A01244 5.0kb downstream 5.0kb downstream 5000 false Chr01: 22929961-22934960 Eucalyptus grandis
Eucgr.A01244 10.0kb upstream 10.0kb upstream 23339 true Chr01: 22906622-22929960 Eucalyptus grandis
Eucgr.A01244 10.0kb upstream 10.0kb upstream 10000 false Chr01: 22906622-22916621 Eucalyptus grandis
Eucgr.A01244 10.0kb downstream 10.0kb downstream 23339 true Chr01: 22916622-22939960 Eucalyptus grandis
Eucgr.A01244 10.0kb downstream 10.0kb downstream 10000 false Chr01: 22929961-22939960 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067394 5270 Rosid View MSA
123737655 5271 Pentapetalae View MSA
122795186 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.73903 0.0 21.6047    
cufflinks 9.9513 0.0 22.0376    
cufflinks 9.33176 0.0 20.694    
cufflinks 7.05867 0.0 15.7443   Low
cufflinks 14.035 0.0 31.0458    
cufflinks 20.1186 0.0 44.6599   High

0 Strain