Gene : Eucgr.A01129 E. grandis v2.0
Defline:  (1 of 2) PTHR11670:SF37 - ACONITATE HYDRATASE 3, MITOCHONDRIAL Genomic Order:  1534
Name:  ? Eucgr.A01129 Secondary Identifier:  ? PAC:32048210
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYOXYLATE-BYPASS Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  
Egrandis PWY-6549 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01129 0.5kb upstream 0.5kb upstream 9649 true Chr01: 31547921-31557569 Eucalyptus grandis
Eucgr.A01129 0.5kb upstream 0.5kb upstream 500 false Chr01: 31547921-31548420 Eucalyptus grandis
Eucgr.A01129 0.5kb downstream 0.5kb downstream 9649 true Chr01: 31548421-31558069 Eucalyptus grandis
Eucgr.A01129 0.5kb downstream 0.5kb downstream 500 false Chr01: 31557570-31558069 Eucalyptus grandis
Eucgr.A01129 1.0kb upstream 1.0kb upstream 10149 true Chr01: 31547421-31557569 Eucalyptus grandis
Eucgr.A01129 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31547421-31548420 Eucalyptus grandis
Eucgr.A01129 1.0kb downstream 1.0kb downstream 10149 true Chr01: 31548421-31558569 Eucalyptus grandis
Eucgr.A01129 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31557570-31558569 Eucalyptus grandis
Eucgr.A01129 2.0kb upstream 2.0kb upstream 11149 true Chr01: 31546421-31557569 Eucalyptus grandis
Eucgr.A01129 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31546421-31548420 Eucalyptus grandis
Eucgr.A01129 2.0kb downstream 2.0kb downstream 11149 true Chr01: 31548421-31559569 Eucalyptus grandis
Eucgr.A01129 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31557570-31559569 Eucalyptus grandis
Eucgr.A01129 5.0kb upstream 5.0kb upstream 14149 true Chr01: 31543421-31557569 Eucalyptus grandis
Eucgr.A01129 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31543421-31548420 Eucalyptus grandis
Eucgr.A01129 5.0kb downstream 5.0kb downstream 14149 true Chr01: 31548421-31562569 Eucalyptus grandis
Eucgr.A01129 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31557570-31562569 Eucalyptus grandis
Eucgr.A01129 10.0kb upstream 10.0kb upstream 19149 true Chr01: 31538421-31557569 Eucalyptus grandis
Eucgr.A01129 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31538421-31548420 Eucalyptus grandis
Eucgr.A01129 10.0kb downstream 10.0kb downstream 19149 true Chr01: 31548421-31567569 Eucalyptus grandis
Eucgr.A01129 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31557570-31567569 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.7279 0.0 204.741 High  
cufflinks 40.455 0.0 92.9075   Low
cufflinks 62.49 0.0 180.989 High  
cufflinks 78.5397 0.0 221.023 High  
cufflinks 60.6999 0.0 143.66 High  
cufflinks 108.815 0.0 322.137 High High

0 Strain