Gene : Eucgr.A01135 E. grandis v2.0
Defline:  (1 of 3) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  1115
Name:  ? Eucgr.A01135 Secondary Identifier:  ? PAC:32049059
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  
Egrandis PWY-6549 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01135 0.5kb upstream 0.5kb upstream 6107 true Chr01: 25299106-25305212 Eucalyptus grandis
Eucgr.A01135 0.5kb upstream 0.5kb upstream 500 false Chr01: 25304713-25305212 Eucalyptus grandis
Eucgr.A01135 0.5kb downstream 0.5kb downstream 6107 true Chr01: 25298606-25304712 Eucalyptus grandis
Eucgr.A01135 0.5kb downstream 0.5kb downstream 500 false Chr01: 25298606-25299105 Eucalyptus grandis
Eucgr.A01135 1.0kb upstream 1.0kb upstream 6607 true Chr01: 25299106-25305712 Eucalyptus grandis
Eucgr.A01135 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25304713-25305712 Eucalyptus grandis
Eucgr.A01135 1.0kb downstream 1.0kb downstream 6607 true Chr01: 25298106-25304712 Eucalyptus grandis
Eucgr.A01135 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25298106-25299105 Eucalyptus grandis
Eucgr.A01135 2.0kb upstream 2.0kb upstream 7607 true Chr01: 25299106-25306712 Eucalyptus grandis
Eucgr.A01135 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25304713-25306712 Eucalyptus grandis
Eucgr.A01135 2.0kb downstream 2.0kb downstream 7607 true Chr01: 25297106-25304712 Eucalyptus grandis
Eucgr.A01135 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25297106-25299105 Eucalyptus grandis
Eucgr.A01135 5.0kb upstream 5.0kb upstream 10607 true Chr01: 25299106-25309712 Eucalyptus grandis
Eucgr.A01135 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25304713-25309712 Eucalyptus grandis
Eucgr.A01135 5.0kb downstream 5.0kb downstream 10607 true Chr01: 25294106-25304712 Eucalyptus grandis
Eucgr.A01135 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25294106-25299105 Eucalyptus grandis
Eucgr.A01135 10.0kb upstream 10.0kb upstream 15607 true Chr01: 25299106-25314712 Eucalyptus grandis
Eucgr.A01135 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25304713-25314712 Eucalyptus grandis
Eucgr.A01135 10.0kb downstream 10.0kb downstream 15607 true Chr01: 25289106-25304712 Eucalyptus grandis
Eucgr.A01135 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25289106-25299105 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.0165 0.0 83.9921 High  
cufflinks 48.3887 0.0 112.444 High  
cufflinks 43.97 0.0 113.467 High  
cufflinks 74.1472 0.0 197.682 High High
cufflinks 42.4164 0.0 97.4082 High  
cufflinks 38.9209 0.0 88.2504 High  

0 Strain