Gene : Eucgr.A01112 E. grandis v2.0
Defline:  (1 of 3) PTHR21495//PTHR21495:SF78 - NUCLEOPORIN-RELATED Genomic Order:  1519
Name:  ? Eucgr.A01112 Secondary Identifier:  ? PAC:32047033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01112 0.5kb upstream 0.5kb upstream 1249 true Chr01: 31337393-31338641 Eucalyptus grandis
Eucgr.A01112 0.5kb upstream 0.5kb upstream 500 false Chr01: 31338142-31338641 Eucalyptus grandis
Eucgr.A01112 0.5kb downstream 0.5kb downstream 1249 true Chr01: 31336893-31338141 Eucalyptus grandis
Eucgr.A01112 0.5kb downstream 0.5kb downstream 500 false Chr01: 31336893-31337392 Eucalyptus grandis
Eucgr.A01112 1.0kb upstream 1.0kb upstream 1749 true Chr01: 31337393-31339141 Eucalyptus grandis
Eucgr.A01112 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31338142-31339141 Eucalyptus grandis
Eucgr.A01112 1.0kb downstream 1.0kb downstream 1749 true Chr01: 31336393-31338141 Eucalyptus grandis
Eucgr.A01112 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31336393-31337392 Eucalyptus grandis
Eucgr.A01112 2.0kb upstream 2.0kb upstream 2749 true Chr01: 31337393-31340141 Eucalyptus grandis
Eucgr.A01112 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31338142-31340141 Eucalyptus grandis
Eucgr.A01112 2.0kb downstream 2.0kb downstream 2749 true Chr01: 31335393-31338141 Eucalyptus grandis
Eucgr.A01112 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31335393-31337392 Eucalyptus grandis
Eucgr.A01112 5.0kb upstream 5.0kb upstream 5749 true Chr01: 31337393-31343141 Eucalyptus grandis
Eucgr.A01112 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31338142-31343141 Eucalyptus grandis
Eucgr.A01112 5.0kb downstream 5.0kb downstream 5749 true Chr01: 31332393-31338141 Eucalyptus grandis
Eucgr.A01112 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31332393-31337392 Eucalyptus grandis
Eucgr.A01112 10.0kb upstream 10.0kb upstream 10749 true Chr01: 31337393-31348141 Eucalyptus grandis
Eucgr.A01112 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31338142-31348141 Eucalyptus grandis
Eucgr.A01112 10.0kb downstream 10.0kb downstream 10749 true Chr01: 31327393-31338141 Eucalyptus grandis
Eucgr.A01112 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31327393-31337392 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.6486 0.0 117.222 High  
cufflinks 11.1836 0.0 28.0911   Low
cufflinks 50.0903 0.0 111.87 High  
cufflinks 35.3024 0.0 80.2731    
cufflinks 64.2834 0.0 142.54 High  
cufflinks 38.809 0.0 87.2703 High  

0 Strain