Gene : Eucgr.A01115 E. grandis v2.0
Defline:  (1 of 3) PTHR21495//PTHR21495:SF78 - NUCLEOPORIN-RELATED Genomic Order:  1521
Name:  ? Eucgr.A01115 Secondary Identifier:  ? PAC:32048762
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01115 0.5kb upstream 0.5kb upstream 1037 true Chr01: 31365223-31366259 Eucalyptus grandis
Eucgr.A01115 0.5kb upstream 0.5kb upstream 500 false Chr01: 31365760-31366259 Eucalyptus grandis
Eucgr.A01115 0.5kb downstream 0.5kb downstream 1037 true Chr01: 31364723-31365759 Eucalyptus grandis
Eucgr.A01115 0.5kb downstream 0.5kb downstream 500 false Chr01: 31364723-31365222 Eucalyptus grandis
Eucgr.A01115 1.0kb upstream 1.0kb upstream 1537 true Chr01: 31365223-31366759 Eucalyptus grandis
Eucgr.A01115 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31365760-31366759 Eucalyptus grandis
Eucgr.A01115 1.0kb downstream 1.0kb downstream 1537 true Chr01: 31364223-31365759 Eucalyptus grandis
Eucgr.A01115 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31364223-31365222 Eucalyptus grandis
Eucgr.A01115 2.0kb upstream 2.0kb upstream 2537 true Chr01: 31365223-31367759 Eucalyptus grandis
Eucgr.A01115 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31365760-31367759 Eucalyptus grandis
Eucgr.A01115 2.0kb downstream 2.0kb downstream 2537 true Chr01: 31363223-31365759 Eucalyptus grandis
Eucgr.A01115 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31363223-31365222 Eucalyptus grandis
Eucgr.A01115 5.0kb upstream 5.0kb upstream 5537 true Chr01: 31365223-31370759 Eucalyptus grandis
Eucgr.A01115 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31365760-31370759 Eucalyptus grandis
Eucgr.A01115 5.0kb downstream 5.0kb downstream 5537 true Chr01: 31360223-31365759 Eucalyptus grandis
Eucgr.A01115 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31360223-31365222 Eucalyptus grandis
Eucgr.A01115 10.0kb upstream 10.0kb upstream 10537 true Chr01: 31365223-31375759 Eucalyptus grandis
Eucgr.A01115 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31365760-31375759 Eucalyptus grandis
Eucgr.A01115 10.0kb downstream 10.0kb downstream 10537 true Chr01: 31355223-31365759 Eucalyptus grandis
Eucgr.A01115 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31355223-31365222 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00345933 0.0 0.118628 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00391375 0.0 0.131332 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0131808 0.0 0.242072 Low  
cufflinks 0.0425546 0.0 0.447715 Low High

0 Strain