Gene : Eucgr.A01119 E. grandis v2.0
Defline:  (1 of 3) 4.2.1.51//4.2.1.91 - Arogenate dehydratase / Carboxycyclohexadienyl dehydratase Genomic Order:  1524
Name:  ? Eucgr.A01119 Secondary Identifier:  ? PAC:32048012
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3462 Eucalyptus grandis pathologic  
Egrandis PWY-3481 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01119 0.5kb upstream 0.5kb upstream 6663 true Chr01: 31415343-31422005 Eucalyptus grandis
Eucgr.A01119 0.5kb upstream 0.5kb upstream 500 false Chr01: 31421506-31422005 Eucalyptus grandis
Eucgr.A01119 0.5kb downstream 0.5kb downstream 6663 true Chr01: 31414843-31421505 Eucalyptus grandis
Eucgr.A01119 0.5kb downstream 0.5kb downstream 500 false Chr01: 31414843-31415342 Eucalyptus grandis
Eucgr.A01119 1.0kb upstream 1.0kb upstream 7163 true Chr01: 31415343-31422505 Eucalyptus grandis
Eucgr.A01119 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31421506-31422505 Eucalyptus grandis
Eucgr.A01119 1.0kb downstream 1.0kb downstream 7163 true Chr01: 31414343-31421505 Eucalyptus grandis
Eucgr.A01119 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31414343-31415342 Eucalyptus grandis
Eucgr.A01119 2.0kb upstream 2.0kb upstream 8163 true Chr01: 31415343-31423505 Eucalyptus grandis
Eucgr.A01119 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31421506-31423505 Eucalyptus grandis
Eucgr.A01119 2.0kb downstream 2.0kb downstream 8163 true Chr01: 31413343-31421505 Eucalyptus grandis
Eucgr.A01119 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31413343-31415342 Eucalyptus grandis
Eucgr.A01119 5.0kb upstream 5.0kb upstream 11163 true Chr01: 31415343-31426505 Eucalyptus grandis
Eucgr.A01119 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31421506-31426505 Eucalyptus grandis
Eucgr.A01119 5.0kb downstream 5.0kb downstream 11163 true Chr01: 31410343-31421505 Eucalyptus grandis
Eucgr.A01119 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31410343-31415342 Eucalyptus grandis
Eucgr.A01119 10.0kb upstream 10.0kb upstream 16163 true Chr01: 31415343-31431505 Eucalyptus grandis
Eucgr.A01119 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31421506-31431505 Eucalyptus grandis
Eucgr.A01119 10.0kb downstream 10.0kb downstream 16163 true Chr01: 31405343-31421505 Eucalyptus grandis
Eucgr.A01119 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31405343-31415342 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29611 0.0 3.92284    
cufflinks 5.6123 0.0 13.3878    
cufflinks 0.997102 0.0 3.25125   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.17552 0.0 13.1821    
cufflinks 4.54366 0.0 11.4695    

0 Strain