Gene : Eucgr.A01106 E. grandis v2.0
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Genomic Order:  1514
Name:  ? Eucgr.A01106 Secondary Identifier:  ? PAC:32048247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01106 0.5kb upstream 0.5kb upstream 5592 true Chr01: 31271217-31276808 Eucalyptus grandis
Eucgr.A01106 0.5kb upstream 0.5kb upstream 500 false Chr01: 31271217-31271716 Eucalyptus grandis
Eucgr.A01106 0.5kb downstream 0.5kb downstream 5592 true Chr01: 31271717-31277308 Eucalyptus grandis
Eucgr.A01106 0.5kb downstream 0.5kb downstream 500 false Chr01: 31276809-31277308 Eucalyptus grandis
Eucgr.A01106 1.0kb upstream 1.0kb upstream 6092 true Chr01: 31270717-31276808 Eucalyptus grandis
Eucgr.A01106 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31270717-31271716 Eucalyptus grandis
Eucgr.A01106 1.0kb downstream 1.0kb downstream 6092 true Chr01: 31271717-31277808 Eucalyptus grandis
Eucgr.A01106 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31276809-31277808 Eucalyptus grandis
Eucgr.A01106 2.0kb upstream 2.0kb upstream 7092 true Chr01: 31269717-31276808 Eucalyptus grandis
Eucgr.A01106 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31269717-31271716 Eucalyptus grandis
Eucgr.A01106 2.0kb downstream 2.0kb downstream 7092 true Chr01: 31271717-31278808 Eucalyptus grandis
Eucgr.A01106 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31276809-31278808 Eucalyptus grandis
Eucgr.A01106 5.0kb upstream 5.0kb upstream 10092 true Chr01: 31266717-31276808 Eucalyptus grandis
Eucgr.A01106 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31266717-31271716 Eucalyptus grandis
Eucgr.A01106 5.0kb downstream 5.0kb downstream 10092 true Chr01: 31271717-31281808 Eucalyptus grandis
Eucgr.A01106 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31276809-31281808 Eucalyptus grandis
Eucgr.A01106 10.0kb upstream 10.0kb upstream 15092 true Chr01: 31261717-31276808 Eucalyptus grandis
Eucgr.A01106 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31261717-31271716 Eucalyptus grandis
Eucgr.A01106 10.0kb downstream 10.0kb downstream 15092 true Chr01: 31271717-31286808 Eucalyptus grandis
Eucgr.A01106 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31276809-31286808 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065261 5270 Rosid View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.2845 0.0 45.7082    
cufflinks 8.10672 0.0 18.899    
cufflinks 13.3739 0.0 34.7237    
cufflinks 7.81206 0.0 18.2124    
cufflinks 4.26915 0.0 10.1327   Low
cufflinks 34.9881 0.0 81.3419 High High

0 Strain