Gene : Eucgr.A01082 E. grandis v2.0

Defline:  (1 of 3) PTHR21668 - EIF-1A Genomic Order:  1491
Name:  ? Eucgr.A01082 Secondary Identifier:  ? PAC:32047032

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01082 0.5kb upstream 0.5kb upstream 938 true Chr01: 30958150-30959087 Eucalyptus grandis
Eucgr.A01082 0.5kb upstream 0.5kb upstream 500 false Chr01: 30958588-30959087 Eucalyptus grandis
Eucgr.A01082 0.5kb downstream 0.5kb downstream 938 true Chr01: 30957650-30958587 Eucalyptus grandis
Eucgr.A01082 0.5kb downstream 0.5kb downstream 500 false Chr01: 30957650-30958149 Eucalyptus grandis
Eucgr.A01082 1.0kb upstream 1.0kb upstream 1438 true Chr01: 30958150-30959587 Eucalyptus grandis
Eucgr.A01082 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30958588-30959587 Eucalyptus grandis
Eucgr.A01082 1.0kb downstream 1.0kb downstream 1438 true Chr01: 30957150-30958587 Eucalyptus grandis
Eucgr.A01082 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30957150-30958149 Eucalyptus grandis
Eucgr.A01082 2.0kb upstream 2.0kb upstream 2438 true Chr01: 30958150-30960587 Eucalyptus grandis
Eucgr.A01082 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30958588-30960587 Eucalyptus grandis
Eucgr.A01082 2.0kb downstream 2.0kb downstream 2438 true Chr01: 30956150-30958587 Eucalyptus grandis
Eucgr.A01082 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30956150-30958149 Eucalyptus grandis
Eucgr.A01082 5.0kb upstream 5.0kb upstream 5438 true Chr01: 30958150-30963587 Eucalyptus grandis
Eucgr.A01082 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30958588-30963587 Eucalyptus grandis
Eucgr.A01082 5.0kb downstream 5.0kb downstream 5438 true Chr01: 30953150-30958587 Eucalyptus grandis
Eucgr.A01082 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30953150-30958149 Eucalyptus grandis
Eucgr.A01082 10.0kb upstream 10.0kb upstream 10438 true Chr01: 30958150-30968587 Eucalyptus grandis
Eucgr.A01082 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30958588-30968587 Eucalyptus grandis
Eucgr.A01082 10.0kb downstream 10.0kb downstream 10438 true Chr01: 30948150-30958587 Eucalyptus grandis
Eucgr.A01082 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30948150-30958149 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 669.909 0.0 1595.94 High  
cufflinks 603.025 0.0 1409.17 High Low
cufflinks 655.479 0.0 1550.61 High  
cufflinks 813.301 0.0 1963.38 High  
cufflinks 817.443 0.0 1975.64 High  
cufflinks 792.972 0.0 1935.4 High  

0 Strain