Gene : Eucgr.A01088 E. grandis v2.0
Defline:  (1 of 1) PTHR12205 - CENTROMERE/KINETOCHORE PROTEIN ZW10 Genomic Order:  1497
Name:  ? Eucgr.A01088 Secondary Identifier:  ? PAC:32046205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01088 0.5kb upstream 0.5kb upstream 6110 true Chr01: 31022377-31028486 Eucalyptus grandis
Eucgr.A01088 0.5kb upstream 0.5kb upstream 500 false Chr01: 31022377-31022876 Eucalyptus grandis
Eucgr.A01088 0.5kb downstream 0.5kb downstream 6110 true Chr01: 31022877-31028986 Eucalyptus grandis
Eucgr.A01088 0.5kb downstream 0.5kb downstream 500 false Chr01: 31028487-31028986 Eucalyptus grandis
Eucgr.A01088 1.0kb upstream 1.0kb upstream 6610 true Chr01: 31021877-31028486 Eucalyptus grandis
Eucgr.A01088 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31021877-31022876 Eucalyptus grandis
Eucgr.A01088 1.0kb downstream 1.0kb downstream 6610 true Chr01: 31022877-31029486 Eucalyptus grandis
Eucgr.A01088 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31028487-31029486 Eucalyptus grandis
Eucgr.A01088 2.0kb upstream 2.0kb upstream 7610 true Chr01: 31020877-31028486 Eucalyptus grandis
Eucgr.A01088 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31020877-31022876 Eucalyptus grandis
Eucgr.A01088 2.0kb downstream 2.0kb downstream 7610 true Chr01: 31022877-31030486 Eucalyptus grandis
Eucgr.A01088 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31028487-31030486 Eucalyptus grandis
Eucgr.A01088 5.0kb upstream 5.0kb upstream 10610 true Chr01: 31017877-31028486 Eucalyptus grandis
Eucgr.A01088 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31017877-31022876 Eucalyptus grandis
Eucgr.A01088 5.0kb downstream 5.0kb downstream 10610 true Chr01: 31022877-31033486 Eucalyptus grandis
Eucgr.A01088 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31028487-31033486 Eucalyptus grandis
Eucgr.A01088 10.0kb upstream 10.0kb upstream 15610 true Chr01: 31012877-31028486 Eucalyptus grandis
Eucgr.A01088 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31012877-31022876 Eucalyptus grandis
Eucgr.A01088 10.0kb downstream 10.0kb downstream 15610 true Chr01: 31022877-31038486 Eucalyptus grandis
Eucgr.A01088 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31028487-31038486 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061765 5270 Rosid View MSA
123741486 5271 Pentapetalae View MSA
122789140 5272 Eudicot View MSA
122044913 5273 Angiosperm View MSA
121344793 5274 Embryophyte View MSA
123424483 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0906 0.0 26.925   Low
cufflinks 12.9812 0.0 28.8215    
cufflinks 13.0355 0.0 28.9511    
cufflinks 14.2306 0.0 31.5287   High
cufflinks 12.3745 0.0 27.5363    
cufflinks 13.1085 0.0 29.1529    

0 Strain