Gene : Eucgr.A01004 E. grandis v2.0
Defline:  (1 of 1) PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM Genomic Order:  1424
Name:  ? Eucgr.A01004 Secondary Identifier:  ? PAC:32047197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01004 0.5kb upstream 0.5kb upstream 10087 true Chr01: 30092451-30102537 Eucalyptus grandis
Eucgr.A01004 0.5kb upstream 0.5kb upstream 500 false Chr01: 30102038-30102537 Eucalyptus grandis
Eucgr.A01004 0.5kb downstream 0.5kb downstream 10087 true Chr01: 30091951-30102037 Eucalyptus grandis
Eucgr.A01004 0.5kb downstream 0.5kb downstream 500 false Chr01: 30091951-30092450 Eucalyptus grandis
Eucgr.A01004 1.0kb upstream 1.0kb upstream 10587 true Chr01: 30092451-30103037 Eucalyptus grandis
Eucgr.A01004 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30102038-30103037 Eucalyptus grandis
Eucgr.A01004 1.0kb downstream 1.0kb downstream 10587 true Chr01: 30091451-30102037 Eucalyptus grandis
Eucgr.A01004 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30091451-30092450 Eucalyptus grandis
Eucgr.A01004 2.0kb upstream 2.0kb upstream 11587 true Chr01: 30092451-30104037 Eucalyptus grandis
Eucgr.A01004 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30102038-30104037 Eucalyptus grandis
Eucgr.A01004 2.0kb downstream 2.0kb downstream 11587 true Chr01: 30090451-30102037 Eucalyptus grandis
Eucgr.A01004 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30090451-30092450 Eucalyptus grandis
Eucgr.A01004 5.0kb upstream 5.0kb upstream 14587 true Chr01: 30092451-30107037 Eucalyptus grandis
Eucgr.A01004 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30102038-30107037 Eucalyptus grandis
Eucgr.A01004 5.0kb downstream 5.0kb downstream 14587 true Chr01: 30087451-30102037 Eucalyptus grandis
Eucgr.A01004 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30087451-30092450 Eucalyptus grandis
Eucgr.A01004 10.0kb upstream 10.0kb upstream 19587 true Chr01: 30092451-30112037 Eucalyptus grandis
Eucgr.A01004 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30102038-30112037 Eucalyptus grandis
Eucgr.A01004 10.0kb downstream 10.0kb downstream 19587 true Chr01: 30082451-30102037 Eucalyptus grandis
Eucgr.A01004 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30082451-30092450 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067492 5270 Rosid View MSA
123740591 5271 Pentapetalae View MSA
122790576 5272 Eudicot View MSA
122047276 5273 Angiosperm View MSA
121346470 5274 Embryophyte View MSA
123428614 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3662 0.0 36.1467    
cufflinks 2.83364 0.0 7.25593    
cufflinks 6.06622 0.0 14.9805    
cufflinks 0.857294 0.0 2.41679   Low
cufflinks 1.07483 0.0 2.97785    
cufflinks 30.6672 0.0 85.055   High

0 Strain