Gene : Eucgr.A00982 E. grandis v2.0
Defline:  (1 of 1) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  1403
Name:  ? Eucgr.A00982 Secondary Identifier:  ? PAC:32049102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00982 0.5kb upstream 0.5kb upstream 3985 true Chr01: 29931128-29935112 Eucalyptus grandis
Eucgr.A00982 0.5kb upstream 0.5kb upstream 500 false Chr01: 29931128-29931627 Eucalyptus grandis
Eucgr.A00982 0.5kb downstream 0.5kb downstream 3985 true Chr01: 29931628-29935612 Eucalyptus grandis
Eucgr.A00982 0.5kb downstream 0.5kb downstream 500 false Chr01: 29935113-29935612 Eucalyptus grandis
Eucgr.A00982 1.0kb upstream 1.0kb upstream 4485 true Chr01: 29930628-29935112 Eucalyptus grandis
Eucgr.A00982 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29930628-29931627 Eucalyptus grandis
Eucgr.A00982 1.0kb downstream 1.0kb downstream 4485 true Chr01: 29931628-29936112 Eucalyptus grandis
Eucgr.A00982 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29935113-29936112 Eucalyptus grandis
Eucgr.A00982 2.0kb upstream 2.0kb upstream 5485 true Chr01: 29929628-29935112 Eucalyptus grandis
Eucgr.A00982 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29929628-29931627 Eucalyptus grandis
Eucgr.A00982 2.0kb downstream 2.0kb downstream 5485 true Chr01: 29931628-29937112 Eucalyptus grandis
Eucgr.A00982 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29935113-29937112 Eucalyptus grandis
Eucgr.A00982 5.0kb upstream 5.0kb upstream 8485 true Chr01: 29926628-29935112 Eucalyptus grandis
Eucgr.A00982 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29926628-29931627 Eucalyptus grandis
Eucgr.A00982 5.0kb downstream 5.0kb downstream 8485 true Chr01: 29931628-29940112 Eucalyptus grandis
Eucgr.A00982 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29935113-29940112 Eucalyptus grandis
Eucgr.A00982 10.0kb upstream 10.0kb upstream 13485 true Chr01: 29921628-29935112 Eucalyptus grandis
Eucgr.A00982 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29921628-29931627 Eucalyptus grandis
Eucgr.A00982 10.0kb downstream 10.0kb downstream 13485 true Chr01: 29931628-29945112 Eucalyptus grandis
Eucgr.A00982 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29935113-29945112 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 165.951 0.0 561.614 High  
cufflinks 125.765 0.0 353.487 High  
cufflinks 180.943 0.0 565.637 High  
cufflinks 134.46 0.0 432.952 High  
cufflinks 120.715 0.0 338.993 High  
cufflinks 378.893 0.0 1405.64 High High

0 Strain